myRT

myRT report for GCA_900118715.1_5965_6_8

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Seq: FPIG01000034.1 Chlamydophila abortus strain AB7 genome assembly, contig: ERS177766SCcontig000034, whole genome shotgun sequence (8548 bp)
Overview 1 RT 1: 2387-8015 bp Neighborhood of RT #1 [2387, 8179] IN_DBD_C RNase_HI_RT_Bel Integrase_Zn rve IN_DBD_C RVT-UNC RVT_thumb dUTPase HIV_retropepsin_like G_patch Gag_p24 ZnF_C2HC zf-CCHC_5 Feature: gene Location: 2387-2785 bp Feature: domain Description: IN_DBD_C Location: 2591-2735 bp Feature: domain Description: IN_DBD_C Location: 2591 -2735 bp Feature: gene Location: 2905-4512 bp Feature: domain Description: RNase_HI_RT_Bel Location: 3292-3658 bp Feature: domain Description: RNase_HI_RT_Bel Location: 3292-3658 bp Feature: domain Description: Integrase_Zn Location: 3691-3799 bp Feature: domain Description: Integrase_Zn Location: 3691 -3799 bp Feature: domain Description: rve Location: 3847-4177 bp Feature: domain Description: rve Location: 3847-41 77 bp Feature: domain Description: IN_DBD_C Location: 4318-4462 bp Feature: domain Description: IN_DBD_C Location: 431 8-4462 bp Feature: gene Location: 4696-5967 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5098-5326 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5098-5326 bp Feature: domain Description: RVT_thumb Location: 5383-5575 bp Feature: domain Description: RVT_thumb Location: 5383-5575 bp Feature: gene Location: 5985-6743 bp Feature: domain Description: dUTPase Location: 6006-6273 bp Feature: domain Description: dUTPase Location: 6006-6273 bp Feature: domain Description: HIV_retropepsin_like Location: 6324-6579 bp Feature: domain Description: HIV_retropepsin_like Location: 6324-6579 bp Feature: domain Description: G_patch Location: 6606-6735 bp Feature: domain Description: G_patch Location: 6606-6735 bp Feature: gene Location: 6758-8179 bp Feature: domain Description: Gag_p24 Location: 7208-7805 bp Feature: domain Description: Gag_p24 Location: 7208-7805 bp Feature: domain Description: ZnF_C2HC Location: 7850-7898 bp Feature: domain Description: ZnF_C2HC Location: 7850-7898 bp Feature: domain Description: zf-CCHC_5 Location: 7931-8015 bp Feature: domain Description: zf-CCHC_5 Location: 7931 -801 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IN_DBD_C (pfam00552), RNase_HI_RT_Bel (cd09273), Integrase_Zn (pfam02022), rve (pfam00665), RVT-UG11/RVT-CRISPR/RVT-GII/RVT-DGRs(RVT-UNC), RVT_thumb (pfam06817), dUTPase (PHA03131), HIV_retropepsin_like (cd05482), G_patch (smart00443), Gag_p24 (pfam00607)
ZnF_C2HC (smart00343), zf-CCHC_5 (pfam14787)

Seq: FPIG01000054.1 Chlamydophila abortus strain AB7 genome assembly, contig: ERS177766SCcontig000054, whole genome shotgun sequence (3795 bp)
Overview 1 RT 1: 2-3623 bp Neighborhood of RT #1 [2, 3715] RVT-UNC RT_RNaseH_2 DUF5535 Feature: gene Location: 2-1867 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 659-905 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 659-905 bp Feature: domain Description: RT_RNaseH_2 Location: 1106-1403 bp Feature: domain Description: RT_RNaseH_2 Location: 1106-1403 bp Feature: gene Location: 2042-3715 bp Feature: domain Description: DUF5535 Location: 3500-3623 bp Feature: domain Description: DUF5535 Location: 3500-362 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-G2L4/RVT-UG26(RVT-UNC), RT_RNaseH_2 (pfam17919), DUF5535 (pfam17687)

Seq: FPIG01000241.1 Chlamydophila abortus strain AB7 genome assembly, contig: ERS177766SCcontig000241, whole genome shotgun sequence (204 bp)
Overview 1 RT 1: 1-193 bp Neighborhood of RT #1 [1, 201] RVT-UG28 Feature: gene Location: 1-201 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 7-193 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 7-193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28