myRT

myRT report for GCA_900119555.1_IMG-taxon_2597490339_annotated_assembly

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Seq: FPKM01000068.1 (19198 bp)
Overview 1 RT 1: 7909-15134 bp Neighborhood of RT #1 [7909, 15211] conj_TOL_TraD conj_conj_conj_TIGR03747 RVT_N RVT-GII GIIM HNH HNH_5 KOG2108 KOG2108 Feature: gene Location: 7909-10131 bp Feature: domain Description: conj_TOL_TraD Location: 7930-9946 bp Feature: domain Description: conj_TOL_TraD Location: 7930-9946 bp Feature: gene Location: 10142-10891 bp Feature: domain Description: conj_conj_conj_TIGR03747 Location: 10193-10889 bp Feature: domain Description: conj_conj_conj_TIGR03747 Location: 1 01 93-1 0889 bp Feature: gene Location: 11573-13282 bp Feature: domain Description: RVT_N Location: 11630-11873 bp Feature: domain Description: RVT_N Location: 1 1 630-1 1 873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11918-12554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 91 8-1 2554 bp Feature: domain Description: GIIM Note: maturase Location: 12605-12839 bp Feature: domain Description: GIIM Note: maturase Location: 1 2605-1 2839 bp Feature: domain Description: HNH Note: nucleases Location: 13094-13229 bp Feature: domain Description: HNH Note: nucleases Location: 1 3094-1 3229 bp Feature: gene Location: 13366-13725 bp Feature: domain Description: HNH_5 Location: 13468-13600 bp Feature: domain Description: HNH_5 Location: 1 3468-1 3600 bp Feature: gene Location: 13736-15211 bp Feature: domain Description: KOG2108 Location: 13790-14573 bp Feature: domain Description: KOG21 08 Location: 1 3790-1 4573 bp Feature: domain Description: KOG2108 Location: 14897-15134 bp Feature: domain Description: KOG21 08 Location: 1 4897-1 51 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000098.1 (8142 bp)
Overview 1 RT 1: 2603-7402 bp Neighborhood of RT #1 [2603, 7413] NTP_transf_5 DDE_Tnp_1 RVT_N RVT-GII GIIM IS5 Feature: gene Location: 2603-3871 bp Feature: domain Description: NTP_transf_5 Location: 2999-3713 bp Feature: domain Description: NTP_transf_5 Location: 2 999-3713 bp Feature: gene Location: 4171-4659 bp Feature: domain Description: DDE_Tnp_1 Location: 4177-4441 bp Feature: domain Description: DDE_Tnp_1 Location: 4177-4441 bp Feature: gene Location: 4771-6288 bp Feature: domain Description: RVT_N Location: 4855-5077 bp Feature: domain Description: RVT_N Location: 4855-5077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5131-5773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5131-5773 bp Feature: domain Description: GIIM Note: maturase Location: 5827-6070 bp Feature: domain Description: GIIM Note: maturase Location: 582 7-6070 bp Feature: gene Location: 6268-6573 bp Feature: gene Location: 6880-7413 bp Feature: domain Description: IS5 Location: 7069-7402 bp Feature: domain Description: IS5 Location: 7069-7402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000012.1 (131058 bp)
Overview 1 RT 1: 113575-118958 bp Neighborhood of RT #1 [113575, 118958] Peptidase_C39A DadA RVT-GII Feature: gene Location: 113575-114342 bp Feature: domain Description: Peptidase_C39A Location: 113890-114298 bp Feature: domain Description: Peptidase_C3 9A Location: 113 890-114298 bp Feature: gene Location: 114354-115637 bp Feature: domain Description: DadA Location: 114441-115572 bp Feature: domain Description: DadA Location: 114441-115572 bp Feature: gene Location: 116505-117050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116730-117048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11673 0-117048 bp Feature: gene Location: 117928-118185 bp Feature: gene Location: 118644-118958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000039.1 (42639 bp)
Overview 1 RT 1: 38809-41963 bp Neighborhood of RT #1 [38809, 42334] LysR PRK11053 RVT-GII Feature: gene Location: 38809-39768 bp Feature: domain Description: LysR Location: 38818-39700 bp Feature: domain Description: LysR Location: 38818-39700 bp Feature: gene Location: 39909-40562 bp Feature: domain Description: PRK11053 Location: 39912-40557 bp Feature: domain Description: PRK11053 Location: 39912-4 0557 bp Feature: gene Location: 40808-42334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41273-41963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 1273-4 1963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000069.1 (18694 bp)
Overview 1 RT 1: 10769-15048 bp Neighborhood of RT #1 [10769, 15074] COG3749 GIIM RVT-GII PRK11778 PhoE Feature: gene Location: 10769-11266 bp Feature: domain Description: COG3749 Location: 10772-11261 bp Feature: domain Description: COG3749 Location: 10772-11261 bp Feature: gene Location: 11368-11670 bp Feature: domain Description: GIIM Note: maturase Location: 11371-11521 bp Feature: domain Description: GIIM Note: maturase Location: 11371-115 21 bp Feature: gene Location: 11707-12717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12022-12634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12022-12634 bp Feature: gene Location: 13141-14169 bp Feature: domain Description: PRK11778 Location: 13156-14140 bp Feature: domain Description: PRK11778 Location: 1315 6-14140 bp Feature: gene Location: 14358-15074 bp Feature: domain Description: PhoE Location: 14373-15048 bp Feature: domain Description: PhoE Location: 14373-15 048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000076.1 (14835 bp)
Overview 1 RT 1: 11743-13898 bp Neighborhood of RT #1 [11743, 14269] PRK10364 HAMP PAS_8 RVT-GII Feature: gene Location: 11743-12033 bp Feature: gene Location: 12027-12935 bp Feature: domain Description: PRK10364 Location: 12045-12417 bp Feature: domain Description: PRK1036 4 Location: 12045-12417 bp Feature: domain Description: HAMP Location: 12615-12768 bp Feature: domain Description: HAMP Location: 126 15-1276 8 bp Feature: domain Description: PAS_8 Location: 12810-12927 bp Feature: domain Description: PAS_8 Location: 12810-12927 bp Feature: gene Location: 13004-14269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13208-13898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13208-13898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FPKM01000010.1 (137148 bp)
Overview 1 RT 1: 3-6553 bp Neighborhood of RT #1 [3, 6567] HTH_29 PRK10839 RVT_N RVT-GII GIIM HNH groEL Feature: gene Location: 3-248 bp Feature: domain Description: HTH_29 Location: 54-249 bp Feature: domain Description: HTH_29 Location: 54-249 bp Feature: gene Location: 1288-1980 bp Feature: domain Description: PRK10839 Location: 1291-1972 bp Feature: domain Description: PRK10839 Location: 1291-197 2 bp Feature: gene Location: 2203-3894 bp Feature: domain Description: RVT_N Location: 2257-2497 bp Feature: domain Description: RVT_N Location: 2257 -2497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-3190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-3190 bp Feature: domain Description: GIIM Note: maturase Location: 3241-3475 bp Feature: domain Description: GIIM Note: maturase Location: 3241-347 5 bp Feature: domain Description: HNH Note: nucleases Location: 3715-3850 bp Feature: domain Description: HNH Note: nucleases Location: 37 15-3850 bp Feature: gene Location: 4171-4605 bp Feature: gene Location: 4927-6567 bp Feature: domain Description: groEL Location: 4933-6553 bp Feature: domain Description: groEL Location: 4933-6553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT