myRT

myRT report for GCA_900120005.1_PRJEB18022

Download annotations/find similar RTs

Seq: LT635452.1 (566301 bp)
Overview 1 RT 1: 259162-270900 bp 2 RT 2: 320669-326085 bp Neighborhood of RT #1 [259162, 270900] RVT-GII GIIM Met_dep_hydrolase_C Met_dep_hydrolase_C TldD TldD RVT-GII GIIM SR_ResInv Neighborhood of RT #2 [320669, 327173] PRK00924 PRK07097 RVT-GII GIIM Penicillinase_R Peptidase_M56 Feature: gene Location: 259162-259641 bp Feature: gene Location: 259653-259835 bp Feature: gene Location: 260479-261777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260680-261298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260680-261 298 bp Feature: domain Description: GIIM Note: maturase Location: 261355-261562 bp Feature: domain Description: GIIM Note: maturase Location: 261 355-261 562 bp Feature: gene Location: 261977-263149 bp Feature: domain Description: Met_dep_hydrolase_C Location: 262067-263117 bp Feature: domain Description: Met_dep_hydrolase_C Location: 262067-2631 1 7 bp Feature: gene Location: 263137-264297 bp Feature: domain Description: Met_dep_hydrolase_C Location: 263221-264289 bp Feature: domain Description: Met_dep_hydrolase_C Location: 263221 -264289 bp Feature: gene Location: 265089-266516 bp Feature: domain Description: TldD Location: 265143-266496 bp Feature: domain Description: TldD Location: 2651 43-266496 bp Feature: gene Location: 266513-267841 bp Feature: domain Description: TldD Location: 266522-267836 bp Feature: domain Description: TldD Location: 266522-267836 bp Feature: gene Location: 268438-269736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268639-269257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268639-269257 bp Feature: domain Description: GIIM Note: maturase Location: 269314-269521 bp Feature: domain Description: GIIM Note: maturase Location: 26931 4-269521 bp Feature: gene Location: 269909-270505 bp Feature: domain Description: SR_ResInv Location: 269924-270329 bp Feature: domain Description: SR_ResInv Location: 269924-270329 bp Feature: gene Location: 270658-270900 bp Feature: gene Location: 320669-321553 bp Feature: domain Description: PRK00924 Location: 320714-321551 bp Feature: domain Description: PRK00924 Location: 32071 4-321 551 bp Feature: gene Location: 321599-322390 bp Feature: domain Description: PRK07097 Location: 321614-322385 bp Feature: domain Description: PRK07097 Location: 321 61 4-322385 bp Feature: gene Location: 322984-324282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323185-323803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3231 85-323803 bp Feature: domain Description: GIIM Note: maturase Location: 323860-324067 bp Feature: domain Description: GIIM Note: maturase Location: 323860-324067 bp Feature: gene Location: 324829-325215 bp Feature: domain Description: Penicillinase_R Location: 324856-325192 bp Feature: domain Description: Penicillinase_R Location: 324856-3251 92 bp Feature: gene Location: 325212-327173 bp Feature: domain Description: Peptidase_M56 Location: 325248-326085 bp Feature: domain Description: Peptidase_M56 Location: 325248-326085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635453.1 (452729 bp)
Overview 1 RT 1: 143811-150313 bp 2 RT 2: 193001-199409 bp Neighborhood of RT #1 [143811, 150315] LD-carboxypeptidase HAD_HPP RVT-GII GIIM PRK09776 GGDEF rpmH Neighborhood of RT #2 [193001, 199435] PrgI VirB4_CagE TraC-F-type RVT-GII TraC-F-type N6_N4_Mtase Feature: gene Location: 143811-144578 bp Feature: domain Description: LD-carboxypeptidase Location: 144039-144531 bp Feature: domain Description: LD-carboxypeptidase Location: 144039-144531 bp Feature: gene Location: 144651-145445 bp Feature: domain Description: HAD_HPP Location: 144663-145434 bp Feature: domain Description: HAD_HPP Location: 144663-145434 bp Feature: gene Location: 146041-147339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146242-146860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462 42 -146860 bp Feature: domain Description: GIIM Note: maturase Location: 146917-147124 bp Feature: domain Description: GIIM Note: maturase Location: 146917-14712 4 bp Feature: gene Location: 147746-149662 bp Feature: domain Description: PRK09776 Location: 148892-149111 bp Feature: domain Description: PRK09776 Location: 148892 -149111 bp Feature: domain Description: GGDEF Location: 149135-149576 bp Feature: domain Description: GGDEF Location: 149135-149576 bp Feature: gene Location: 150181-150315 bp Feature: domain Description: rpmH Location: 150184-150313 bp Feature: domain Description: rpmH Location: 150184-150313 bp Feature: gene Location: 193001-193393 bp Feature: domain Description: PrgI Location: 193019-193289 bp Feature: domain Description: PrgI Location: 193019-1932 89 bp Feature: gene Location: 193353-195332 bp Feature: domain Description: VirB4_CagE Location: 193467-193902 bp Feature: domain Description: VirB4_CagE Location: 193467-193902 bp Feature: domain Description: TraC-F-type Location: 194151-195276 bp Feature: domain Description: TraC-F-type Location: 194151-1952 76 bp Feature: gene Location: 196041-197924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196359-197061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196359-197061 bp Feature: gene Location: 198117-198482 bp Feature: domain Description: TraC-F-type Location: 198126-198312 bp Feature: domain Description: TraC-F-type Location: 19812 6-198312 bp Feature: gene Location: 198479-199435 bp Feature: domain Description: N6_N4_Mtase Location: 198554-199409 bp Feature: domain Description: N6_N4_Mtase Location: 198554-199409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635449.1 (421409 bp)
Overview 1 RT 1: 342757-346238 bp Neighborhood of RT #1 [342757, 346264] YlmH RVT-GII GIIM YlmF YlmC Feature: gene Location: 342757-343230 bp Feature: domain Description: YlmH Location: 342763-343225 bp Feature: domain Description: YlmH Location: 3 42763 -3 43 225 bp Feature: gene Location: 343216-343377 bp Feature: gene Location: 343485-344783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343686-344304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 43 686-3 443 04 bp Feature: domain Description: GIIM Note: maturase Location: 344361-344568 bp Feature: domain Description: GIIM Note: maturase Location: 3 443 61-3 44568 bp Feature: gene Location: 345431-345838 bp Feature: domain Description: YlmF Location: 345569-345827 bp Feature: domain Description: YlmF Location: 3 45569-3 45827 bp Feature: gene Location: 345998-346264 bp Feature: domain Description: YlmC Location: 346001-346238 bp Feature: domain Description: YlmC Location: 3 46001-3 4623 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635450.1 (394692 bp)
Overview 1 RT 1: 291804-297017 bp 2 RT 2: 308480-314420 bp Neighborhood of RT #1 [291804, 297076] AgaB ManX RVT-GII GIIM PspF LevR Neighborhood of RT #2 [308480, 314420] Hydrolase_3 Acetyltransf_3 RVT-GII GIIM Tra8 Tra8 Feature: gene Location: 291804-292250 bp Feature: domain Description: AgaB Location: 291807-292248 bp Feature: domain Description: AgaB Location: 291807-29224 8 bp Feature: gene Location: 292244-292678 bp Feature: domain Description: ManX Location: 292247-292643 bp Feature: domain Description: ManX Location: 29224 7-29264 3 bp Feature: gene Location: 292851-294149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293052-293670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293052-293670 bp Feature: domain Description: GIIM Note: maturase Location: 293727-293934 bp Feature: domain Description: GIIM Note: maturase Location: 293727-293934 bp Feature: gene Location: 294622-294750 bp Feature: gene Location: 294755-297076 bp Feature: domain Description: PspF Location: 294782-295391 bp Feature: domain Description: PspF Location: 294 782-295391 bp Feature: domain Description: LevR Location: 295628-297017 bp Feature: domain Description: LevR Location: 295628-297017 bp Feature: gene Location: 308480-309280 bp Feature: domain Description: Hydrolase_3 Location: 308492-309236 bp Feature: domain Description: Hydrolase_3 Location: 3084 92-309236 bp Feature: gene Location: 309436-310041 bp Feature: domain Description: Acetyltransf_3 Location: 309487-309895 bp Feature: domain Description: Acetyltransf_3 Location: 3094 87-309895 bp Feature: gene Location: 310292-311590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310493-311111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3104 93-311111 bp Feature: domain Description: GIIM Note: maturase Location: 311168-311375 bp Feature: domain Description: GIIM Note: maturase Location: 311168-311375 bp Feature: gene Location: 312566-313873 bp Feature: domain Description: Tra8 Location: 312572-312698 bp Feature: domain Description: Tra8 Location: 312572-312698 bp Feature: domain Description: Tra8 Location: 312923-313778 bp Feature: domain Description: Tra8 Location: 312923-313778 bp Feature: gene Location: 314145-314420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635451.1 (684045 bp)
Overview 1 RT 1: 322951-329051 bp 2 RT 2: 363580-367601 bp Neighborhood of RT #1 [322951, 329065] PRK01565 RVT-GII GIIM BglG PtsN Neighborhood of RT #2 [363580, 367741] HK_WalK TMAO_torS RVT-GII GIIM MarR Flavodoxin_5 Feature: gene Location: 322951-324147 bp Feature: domain Description: PRK01565 Location: 322969-324115 bp Feature: domain Description: PRK015 65 Location: 322969-324115 bp Feature: gene Location: 324256-324948 bp Feature: gene Location: 325546-326844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325747-326365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325 747-326365 bp Feature: domain Description: GIIM Note: maturase Location: 326422-326629 bp Feature: domain Description: GIIM Note: maturase Location: 326422-326629 bp Feature: gene Location: 326893-327120 bp Feature: gene Location: 327146-329065 bp Feature: domain Description: BglG Location: 327152-328454 bp Feature: domain Description: BglG Location: 32715 2-32845 4 bp Feature: domain Description: PtsN Location: 328631-329051 bp Feature: domain Description: PtsN Location: 328631-32905 1 bp Feature: gene Location: 363580-364611 bp Feature: domain Description: HK_WalK Location: 363595-363904 bp Feature: domain Description: HK_WalK Location: 3635 95 -363904 bp Feature: domain Description: TMAO_torS Location: 363919-364600 bp Feature: domain Description: TMAO_torS Location: 363919-364600 bp Feature: gene Location: 364625-364768 bp Feature: gene Location: 365241-366539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365442-366060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365 442-366060 bp Feature: domain Description: GIIM Note: maturase Location: 366117-366324 bp Feature: domain Description: GIIM Note: maturase Location: 366117-366324 bp Feature: gene Location: 366726-367205 bp Feature: domain Description: MarR Location: 366849-367179 bp Feature: domain Description: MarR Location: 366849-367179 bp Feature: gene Location: 367202-367741 bp Feature: domain Description: Flavodoxin_5 Location: 367217-367601 bp Feature: domain Description: Flavodoxin_5 Location: 367217-367601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT