myRT

myRT report for GCA_900128405.1_BBROOKSOX

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Seq: FQTS01000288.1 (1394 bp)
Overview 1 RT 1: 1-1360 bp Neighborhood of RT #1 [1, 1392] RVT-UNC Feature: gene Location: 1-1392 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 919-1360 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 91 9-1 360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FQTS01000172.1 (2579 bp)
Overview 1 RT 1: 3-1359 bp Neighborhood of RT #1 [3, 2420] RVT-GII Feature: gene Location: 3-2420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 690-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 690-1359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000165.1 (2720 bp)
Overview 1 RT 1: 367-1483 bp Neighborhood of RT #1 [367, 2502] RVT-CRISPR-like Feature: gene Location: 367-2502 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 877-1483 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 877-1483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000182.1 (2415 bp)
Overview 1 RT 1: 2-1244 bp Neighborhood of RT #1 [2, 2047] RVT-CRISPR-like Feature: gene Location: 2-2047 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 743-1244 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 74 3-124 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000162.1 (2819 bp)
Overview 1 RT 1: 1-2800 bp Neighborhood of RT #1 [1, 2817] RVT-CRISPR-like RVT-GII Feature: gene Location: 1-1368 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 97-346 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 97-346 bp Feature: gene Location: 2046-2222 bp Feature: gene Location: 2290-2817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347-2800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347-2800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RVT-GII

Seq: FQTS01000063.1 (8291 bp)
Overview 1 RT 1: 1-4729 bp Neighborhood of RT #1 [1, 4729] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 1-2814 bp Feature: domain Description: Exo_endo_phos_2 Location: 277-628 bp Feature: domain Description: Exo_endo_phos_2 Location: 277-6 28 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1501-2137 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1501-2137 bp Feature: gene Location: 3992-4249 bp Feature: gene Location: 4574-4729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000090.1 (5712 bp)
Overview 1 RT 1: 1-4381 bp Neighborhood of RT #1 [1, 4381] RVT-CRISPR-like Feature: gene Location: 1-2538 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 784-1429 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7 84-1429 bp Feature: gene Location: 3205-3348 bp Feature: gene Location: 4175-4381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000123.1 (4093 bp)
Overview 1 RT 1: 221-3419 bp Neighborhood of RT #1 [221, 4090] PHD_PYGO PHD_PYGO Exo_endo_phos_2 RVT-CRISPR-like Feature: gene Location: 221-4090 bp Feature: domain Description: PHD_PYGO Location: 521-674 bp Feature: domain Description: PHD_PYGO Location: 521-674 bp Feature: domain Description: PHD_PYGO Location: 884-1037 bp Feature: domain Description: PHD_PYGO Location: 8 8 4-1037 bp Feature: domain Description: Exo_endo_phos_2 Location: 1556-1904 bp Feature: domain Description: Exo_endo_phos_2 Location: 1556-1904 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2789-3419 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 278 9-3419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHD_PYGO (cd15551), Exo_endo_phos_2 (pfam14529), RVT-CRISPR

Seq: FQTS01000229.1 (1848 bp)
Overview 1 RT 1: 1-1194 bp Neighborhood of RT #1 [1, 1847] RVT-CRISPR-like Feature: gene Location: 1-144 bp Feature: gene Location: 212-556 bp Feature: gene Location: 645-1847 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 669-1194 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 669 -119 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000272.1 (1482 bp)
Overview 1 RT 1: 3-978 bp Neighborhood of RT #1 [3, 1415] RVT-UNC Feature: gene Location: 3-1415 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 342-978 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 342-978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR/RVT-DGRs(RVT-UNC)

Seq: FQTS01000111.1 (4507 bp)
Overview 1 RT 1: 34-4387 bp Neighborhood of RT #1 [34, 4387] L1-EN RVT-UNC Feature: gene Location: 34-174 bp Feature: gene Location: 719-4171 bp Feature: domain Description: L1-EN Location: 1019-1634 bp Feature: domain Description: L1-EN Location: 1019-1634 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2531-3164 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2531-3164 bp Feature: gene Location: 4187-4387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG2/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000349.1 (1100 bp)
Overview 1 RT 1: 2-275 bp Neighborhood of RT #1 [2, 916] RVT-CRISPR-like Feature: gene Location: 2-916 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 14-275 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 14-275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000304.1 (1295 bp)
Overview 1 RT 1: 1-1288 bp Neighborhood of RT #1 [1, 1293] RVT-UNC Feature: gene Location: 1-1293 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 982-1288 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 982-1288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000128.1 (3946 bp)
Overview 1 RT 1: 259-2536 bp Neighborhood of RT #1 [259, 3645] RVT-UNC Feature: gene Location: 259-3645 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2029-2536 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2029-2536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-AbiA(RVT-UNC)

Seq: FQTS01000102.1 (4979 bp)
Overview 1 RT 1: 295-4426 bp Neighborhood of RT #1 [295, 4426] L1-EN RVT-CRISPR-like Feature: gene Location: 295-3750 bp Feature: domain Description: L1-EN Location: 601-1207 bp Feature: domain Description: L1-EN Location: 601-1207 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2107-2737 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2107-2737 bp Feature: gene Location: 3891-4034 bp Feature: gene Location: 4250-4426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: FQTS01000130.1 (3768 bp)
Overview 1 RT 1: 3-3766 bp Neighborhood of RT #1 [3, 3766] L1-EN RVT-UNC zf-RVT Feature: gene Location: 3-3344 bp Feature: domain Description: L1-EN Location: 96-573 bp Feature: domain Description: L1-EN Location: 96-573 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1707-2154 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1707-2154 bp Feature: domain Description: zf-RVT Location: 2952-3072 bp Feature: domain Description: zf-RVT Location: 2952-3072 bp Feature: gene Location: 3611-3766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC), zf-RVT (pfam13966)

Seq: FQTS01000284.1 (1421 bp)
Overview 1 RT 1: 1-1420 bp Neighborhood of RT #1 [1, 1419] RVT-CRISPR-like RNase_HI_RT_Ty3 Integrase_H2C2 Feature: gene Location: 1-1419 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 166-319 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 166-319 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 619-970 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 619-970 bp Feature: domain Description: Integrase_H2C2 Location: 1294-1420 bp Feature: domain Description: Integrase_H2C2 Location: 1294-1420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921)

Seq: FQTS01000241.1 (1771 bp)
Overview 1 RT 1: 1-1360 bp Neighborhood of RT #1 [1, 1770] RVT-GII Feature: gene Location: 1-1770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-1360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000290.1 (1370 bp)
Overview 1 RT 1: 1-721 bp Neighborhood of RT #1 [1, 1368] RVT-UNC Feature: gene Location: 1-1368 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 58-721 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 58-721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FQTS01000244.1 (1707 bp)
Overview 1 RT 1: 1-1162 bp Neighborhood of RT #1 [1, 1704] RVT-GII Feature: gene Location: 1-1704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-1162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-1162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000169.1 (2652 bp)
Overview 1 RT 1: 552-2628 bp Neighborhood of RT #1 [552, 2651] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 552-2651 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1284-1689 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1284-1689 bp Feature: domain Description: GIY-YIG_PLEs Location: 2364-2628 bp Feature: domain Description: GIY-YIG_PLEs Location: 2364-2628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25/RVT-UG3/RVT-UG5(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FQTS01000093.1 (5489 bp)
Overview 1 RT 1: 258-5486 bp Neighborhood of RT #1 [258, 5486] XthA RVT-UNC PRK03918 Feature: gene Location: 258-3917 bp Feature: domain Description: XthA Location: 435-909 bp Feature: domain Description: XthA Location: 435-909 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2184-2853 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2184-2853 bp Feature: gene Location: 4017-5048 bp Feature: domain Description: PRK03918 Location: 4056-4485 bp Feature: domain Description: PRK03918 Location: 4056-4485 bp Feature: gene Location: 5340-5486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XthA (COG0708), RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC), PRK03918 (DNA double-strand break repair ATPase Rad50)

Seq: FQTS01000160.1 (2898 bp)
Overview 1 RT 1: 1-2381 bp Neighborhood of RT #1 [1, 2896] RVT-UNC Feature: gene Location: 1-168 bp Feature: gene Location: 208-348 bp Feature: gene Location: 605-2896 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1757-2381 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1757-23 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000107.1 (4719 bp)
Overview 1 RT 1: 277-3769 bp Neighborhood of RT #1 [277, 4077] L1-EN RVT-UNC zf-RVT Feature: gene Location: 277-4077 bp Feature: domain Description: L1-EN Location: 295-982 bp Feature: domain Description: L1-EN Location: 295-982 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2005-2554 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2005-2554 bp Feature: domain Description: zf-RVT Location: 3565-3769 bp Feature: domain Description: zf-RVT Location: 3565-3769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR/RVT-UG28(RVT-UNC), zf-RVT (pfam13966)

Seq: FQTS01000188.1 (2266 bp)
Overview 1 RT 1: 467-1337 bp Neighborhood of RT #1 [467, 1996] RVT-CRISPR-like Feature: gene Location: 467-1996 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 710-1337 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 710-1337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000088.1 (5867 bp)
Overview 1 RT 1: 3-5262 bp Neighborhood of RT #1 [3, 5585] AIR1 NnaC_like L1-EN RVT-GII zf-RVT Feature: gene Location: 3-1352 bp Feature: domain Description: AIR1 Location: 351-591 bp Feature: domain Description: AIR1 Location: 351-591 bp Feature: domain Description: NnaC_like Location: 753-1212 bp Feature: domain Description: NnaC_like Location: 753-1212 bp Feature: gene Location: 1782-5585 bp Feature: domain Description: L1-EN Location: 1797-2499 bp Feature: domain Description: L1-EN Location: 1797-2499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360-3996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360-3996 bp Feature: domain Description: zf-RVT Location: 5061-5262 bp Feature: domain Description: zf-RVT Location: 5061-526 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AIR1 (COG5082), NnaC_like (cd01841), L1-EN (cd09076), RVT-GII, zf-RVT (pfam13966)

Seq: FQTS01000092.1 (5547 bp)
Overview 1 RT 1: 3-4256 bp Neighborhood of RT #1 [3, 5545] L1-EN RVT-UNC PHD_MLL5 Feature: gene Location: 3-161 bp Feature: gene Location: 633-3923 bp Feature: domain Description: L1-EN Location: 687-1203 bp Feature: domain Description: L1-EN Location: 687-1203 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2133-2769 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2133-27 69 bp Feature: gene Location: 4049-5545 bp Feature: domain Description: PHD_MLL5 Location: 4139-4256 bp Feature: domain Description: PHD_MLL5 Location: 4139-4256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC), PHD_MLL5 (cd15550)

Seq: FQTS01000247.1 (1685 bp)
Overview 1 RT 1: 2-1025 bp Neighborhood of RT #1 [2, 1684] RVT-GII Feature: gene Location: 2-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-1025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-1025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000140.1 (3501 bp)
Overview 1 RT 1: 309-3030 bp Neighborhood of RT #1 [309, 3041] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 309-3041 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1674-2085 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1674-2085 bp Feature: domain Description: GIY-YIG_PLEs Location: 2754-3030 bp Feature: domain Description: GIY-YIG_PLEs Location: 2754-3030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-GII/RVT-CRISPR/RVT-Retrons(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FQTS01000112.1 (4480 bp)
Overview 1 RT 1: 3-4424 bp Neighborhood of RT #1 [3, 4477] L1-EN RVT-CRISPR-like zf-RVT Feature: gene Location: 3-560 bp Feature: gene Location: 929-4477 bp Feature: domain Description: L1-EN Location: 950-1637 bp Feature: domain Description: L1-EN Location: 950-1637 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2564-3215 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2564-3215 bp Feature: domain Description: zf-RVT Location: 4265-4424 bp Feature: domain Description: zf-RVT Location: 4265-4424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR, zf-RVT (pfam13966)

Seq: FQTS01000287.1 (1397 bp)
Overview 1 RT 1: 1-832 bp Neighborhood of RT #1 [1, 1395] RVT-UNC Feature: gene Location: 1-1395 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 193-832 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 193-832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FQTS01000069.1 (7599 bp)
Overview 1 RT 1: 107-3629 bp Neighborhood of RT #1 [107, 3629] RVT-GII Feature: gene Location: 107-331 bp Feature: gene Location: 1402-2841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1471-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1471-1816 bp Feature: gene Location: 2947-3135 bp Feature: gene Location: 3375-3629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000258.1 (1574 bp)
Overview 1 RT 1: 198-903 bp Neighborhood of RT #1 [198, 1571] RVT-CRISPR-like Feature: gene Location: 198-1571 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 294-903 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 294-903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000077.1 (6526 bp)
Overview 1 RT 1: 1-6479 bp Neighborhood of RT #1 [1, 6523] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve KOG2714 Feature: gene Location: 1-1368 bp Feature: gene Location: 1434-5357 bp Feature: domain Description: retropepsin_like Location: 1443-1680 bp Feature: domain Description: retropepsin_like Location: 1443-1680 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2709-2898 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2709-2898 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3189-3543 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3189-3543 bp Feature: domain Description: Integrase_H2C2 Location: 4263-4437 bp Feature: domain Description: Integrase_H2C2 Location: 4263-4437 bp Feature: domain Description: rve Location: 4488-4824 bp Feature: domain Description: rve Location: 4488-4824 bp Feature: gene Location: 5489-6523 bp Feature: domain Description: KOG2714 Location: 6380-6479 bp Feature: domain Description: KOG2714 Location: 6380-6479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-DGRs/RVT-UG26/RVT-GII/RVT-UG11(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), KOG2714 (KOG2714, SETA binding protein SB1 and related proteins, contain BTB/POZ domain )

Seq: FQTS01000301.1 (1330 bp)
Overview 1 RT 1: 3-186 bp Neighborhood of RT #1 [3, 1328] RVT-UNC Feature: gene Location: 3-1328 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 27-186 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 27-186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28/RVT-UG7/RVT-UG11(RVT-UNC)

Seq: FQTS01000103.1 (4965 bp)
Overview 1 RT 1: 1-2797 bp Neighborhood of RT #1 [1, 3579] PHD_PYGO ExoIII-like_AP-endo RVT-UNC Feature: gene Location: 1-3579 bp Feature: domain Description: PHD_PYGO Location: 415-568 bp Feature: domain Description: PHD_PYGO Location: 415-568 bp Feature: domain Description: ExoIII-like_AP-endo Location: 760-1165 bp Feature: domain Description: ExoIII-like_AP-endo Location: 760-1165 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2263-2797 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2263-2797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHD_PYGO (cd15551), ExoIII-like_AP-endo (cd09086), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FQTS01000232.1 (1822 bp)
Overview 1 RT 1: 1-1012 bp Neighborhood of RT #1 [1, 1692] RVT-GII Feature: gene Location: 1-1692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000149.1 (3229 bp)
Overview 1 RT 1: 1-3091 bp Neighborhood of RT #1 [1, 3091] RVT-CRISPR-like Feature: gene Location: 1-2637 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1084-1546 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1084-1546 bp Feature: gene Location: 2927-3091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000132.1 (3716 bp)
Overview 1 RT 1: 437-2888 bp Neighborhood of RT #1 [437, 3715] L1-EN RVT-CRISPR-like Feature: gene Location: 437-3715 bp Feature: domain Description: L1-EN Location: 758-1364 bp Feature: domain Description: L1-EN Location: 758-1364 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2261-2888 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2261-2888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: FQTS01000148.1 (3264 bp)
Overview 1 RT 1: 3-2715 bp Neighborhood of RT #1 [3, 3263] PHD_PYGO XthA RVT-CRISPR-like Feature: gene Location: 3-3263 bp Feature: domain Description: PHD_PYGO Location: 405-558 bp Feature: domain Description: PHD_PYGO Location: 40 5-558 bp Feature: domain Description: XthA Location: 720-1146 bp Feature: domain Description: XthA Location: 720-1146 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2214-2715 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2214-2715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHD_PYGO (cd15551), XthA (COG0708), RVT-CRISPR

Seq: FQTS01000081.1 (6220 bp)
Overview 1 RT 1: 393-5846 bp Neighborhood of RT #1 [393, 5846] L1-EN RVT-GII zf-RVT Feature: gene Location: 393-4172 bp Feature: domain Description: L1-EN Location: 414-1104 bp Feature: domain Description: L1-EN Location: 41 4-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2007-2652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2007-2652 bp Feature: domain Description: zf-RVT Location: 3732-3867 bp Feature: domain Description: zf-RVT Location: 3732-3867 bp Feature: gene Location: 4899-5846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, zf-RVT (pfam13966)

Seq: FQTS01000259.1 (1559 bp)
Overview 1 RT 1: 3-966 bp Neighborhood of RT #1 [3, 1556] RVT-CRISPR-like Feature: gene Location: 3-1556 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 321-966 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 321-966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000190.1 (2251 bp)
Overview 1 RT 1: 3-2249 bp Neighborhood of RT #1 [3, 2249] RVT-UNC Feature: gene Location: 3-1826 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 513-1065 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 513-1065 bp Feature: gene Location: 2094-2249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-DGRs/RVT-UG11(RVT-UNC)

Seq: FQTS01000161.1 (2861 bp)
Overview 1 RT 1: 1-1504 bp Neighborhood of RT #1 [1, 2547] RVT-CRISPR-like Feature: gene Location: 1-2547 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 811-1504 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 811-1504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000207.1 (2089 bp)
Overview 1 RT 1: 3-1227 bp Neighborhood of RT #1 [3, 1874] RVT-UNC Feature: gene Location: 3-1874 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 603-1227 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 603-1227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000173.1 (2535 bp)
Overview 1 RT 1: 2-2534 bp Neighborhood of RT #1 [2, 2534] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 2-2365 bp Feature: domain Description: Exo_endo_phos_2 Location: 362-713 bp Feature: domain Description: Exo_endo_phos_2 Location: 362-713 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1571-2192 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1571-2192 bp Feature: gene Location: 2250-2534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000120.1 (4252 bp)
Overview 1 RT 1: 1-3614 bp Neighborhood of RT #1 [1, 3907] L1-EN RVT-UNC zf-RVT Feature: gene Location: 1-141 bp Feature: gene Location: 134-3907 bp Feature: domain Description: L1-EN Location: 155-845 bp Feature: domain Description: L1-EN Location: 155-845 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1742-2414 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1742-2414 bp Feature: domain Description: zf-RVT Location: 3440-3614 bp Feature: domain Description: zf-RVT Location: 3440-3614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-Retrons(RVT-UNC), zf-RVT (pfam13966)

Seq: FQTS01000237.1 (1794 bp)
Overview 1 RT 1: 118-798 bp Neighborhood of RT #1 [118, 1463] RVT-CRISPR-like Feature: gene Location: 118-288 bp Feature: gene Location: 387-1463 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 501-798 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 501-798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000154.1 (3046 bp)
Overview 1 RT 1: 3-1839 bp Neighborhood of RT #1 [3, 2897] RVT-GII Feature: gene Location: 3-2897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1170-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1170-1839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FQTS01000210.1 (2065 bp)
Overview 1 RT 1: 3-2064 bp Neighborhood of RT #1 [3, 2064] RVT-CRISPR-like Feature: gene Location: 3-953 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9-468 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9-468 bp Feature: gene Location: 1577-1714 bp Feature: gene Location: 1915-2064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000224.1 (1865 bp)
Overview 1 RT 1: 1-295 bp Neighborhood of RT #1 [1, 1293] RVT-CRISPR-like Feature: gene Location: 1-1293 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 34-295 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 34-295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FQTS01000167.1 (2676 bp)
Overview 1 RT 1: 110-1875 bp Neighborhood of RT #1 [110, 2675] RVT-UNC Feature: gene Location: 110-304 bp Feature: gene Location: 501-2675 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1368-1875 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1368-1875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FQTS01000086.1 (5967 bp)
Overview 1 RT 1: 364-5695 bp Neighborhood of RT #1 [364, 5695] L1-EN RVT-GII zf-RVT Feature: gene Location: 364-4137 bp Feature: domain Description: L1-EN Location: 385-1075 bp Feature: domain Description: L1-EN Location: 385-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1972-2635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1972-2635 bp Feature: domain Description: zf-RVT Location: 3697-3853 bp Feature: domain Description: zf-RVT Location: 3697-3853 bp Feature: gene Location: 4673-5695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, zf-RVT (pfam13966)

Seq: FQTS01000105.1 (4927 bp)
Overview 1 RT 1: 136-4611 bp Neighborhood of RT #1 [136, 4925] PNMA KOG4400 retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 136-1383 bp Feature: domain Description: PNMA Location: 376-826 bp Feature: domain Description: PNMA Location: 376-826 bp Feature: domain Description: KOG4400 Location: 1177-1330 bp Feature: domain Description: KOG4400 Location: 1177-1330 bp Feature: gene Location: 1392-4925 bp Feature: domain Description: retropepsin_like Location: 1476-1776 bp Feature: domain Description: retropepsin_like Location: 1476-1776 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2859-2997 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2859-2997 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3345-3702 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3345-3702 bp Feature: domain Description: Integrase_H2C2 Location: 4068-4236 bp Feature: domain Description: Integrase_H2C2 Location: 4068-4236 bp Feature: domain Description: rve Location: 4278-4611 bp Feature: domain Description: rve Location: 4278-4611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PNMA (pfam14893), KOG4400 (KOG4400, E3 ubiquitin ligase interacting with arginine methyltransferase ), retropepsin_like (cd00303), RVT-UG11/RVT-UG26/RVT-DGRs/RVT-UG10(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: FQTS01000245.1 (1686 bp)
Overview 1 RT 1: 1-1396 bp Neighborhood of RT #1 [1, 1533] RVT-UNC Feature: gene Location: 1-1533 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 757-1396 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 757-1396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FQTS01000317.1 (1243 bp)
Overview 1 RT 1: 1-982 bp Neighborhood of RT #1 [1, 1242] RVT-UNC Feature: gene Location: 1-1242 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 370-982 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 370-982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG11(RVT-UNC)