myRT

myRT report for GCA_900128475.1_PRJEB18047

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Seq: LT635836.1 (709922 bp)
Overview 1 RT 1: 116382-122002 bp Neighborhood of RT #1 [116382, 122002] A_NRPS Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 Feature: gene Location: 116382-117638 bp Feature: domain Description: A_NRPS Location: 116388-117618 bp Feature: domain Description: A_NRPS Location: 1 1 6388-1 1 761 8 bp Feature: gene Location: 117921-119078 bp Feature: domain Description: Arm-DNA-bind_5 Location: 117963-118203 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 1 7963-1 1 8203 bp Feature: domain Description: Phage_int_SAM_5 Location: 118257-118557 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 1 8257-1 1 8557 bp Feature: domain Description: INTN1_C_like Location: 118599-119061 bp Feature: domain Description: INTN1 _C_like Location: 1 1 8599-1 1 9061 bp Feature: gene Location: 119625-121433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119889-120711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9889-1 2071 1 bp Feature: domain Description: Intron_maturas2 Location: 120822-121089 bp Feature: domain Description: Intron_maturas2 Location: 1 20822-1 21 089 bp Feature: gene Location: 121435-121620 bp Feature: gene Location: 121631-122002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635837.1 (516312 bp)
Overview 1 RT 1: 150342-155579 bp Neighborhood of RT #1 [150342, 155776] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons HTH_17 DUF3987 Feature: gene Location: 150342-151448 bp Feature: domain Description: Arm-DNA-bind_5 Location: 150366-150573 bp Feature: domain Description: Arm-DNA-bind_5 Location: 150366-150573 bp Feature: domain Description: Phage_int_SAM_5 Location: 150630-150897 bp Feature: domain Description: Phage_int_SAM_5 Location: 150630-150897 bp Feature: domain Description: INTN1_C_like Location: 150957-151416 bp Feature: domain Description: INTN1_C_like Location: 150957-151416 bp Feature: gene Location: 151647-152414 bp Feature: gene Location: 152459-153316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 152621-153146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 152 62 1-153146 bp Feature: gene Location: 154029-154397 bp Feature: domain Description: HTH_17 Location: 154167-154305 bp Feature: domain Description: HTH_17 Location: 154167-154305 bp Feature: gene Location: 154409-155776 bp Feature: domain Description: DUF3987 Location: 154559-155579 bp Feature: domain Description: DUF3987 Location: 154559-155579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635838.1 (816971 bp)
Overview 1 RT 1: 767737-770567 bp Neighborhood of RT #1 [767737, 770567] RVT-DGRs Feature: gene Location: 767737-767970 bp Feature: gene Location: 768168-768323 bp Feature: gene Location: 768349-769650 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 768562-769156 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 768562-769156 bp Feature: gene Location: 769650-770135 bp Feature: gene Location: 770325-770567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635835.1 (507215 bp)
Overview 1 RT 1: 128475-131295 bp 2 RT 2: 358279-363185 bp Neighborhood of RT #1 [128475, 131295] RVT-DGRs Neighborhood of RT #2 [358279, 363185] YWFCY RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 128475-128717 bp Feature: gene Location: 128903-129352 bp Feature: gene Location: 129385-130686 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 129598-130192 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 129598-130192 bp Feature: gene Location: 130783-131040 bp Feature: gene Location: 131062-131295 bp Feature: gene Location: 358279-359001 bp Feature: domain Description: YWFCY Location: 358285-358462 bp Feature: domain Description: YWFCY Location: 358285-3584 62 bp Feature: gene Location: 359201-359347 bp Feature: gene Location: 359622-361277 bp Feature: domain Description: RVT_N Location: 359676-359919 bp Feature: domain Description: RVT_N Location: 359676-359919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359964-360609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359964 -360609 bp Feature: domain Description: GIIM Note: maturase Location: 360660-360894 bp Feature: domain Description: GIIM Note: maturase Location: 360660-360894 bp Feature: gene Location: 361274-362698 bp Feature: domain Description: TraG-D_C Location: 362048-362381 bp Feature: domain Description: TraG-D_C Location: 36204 8-362381 bp Feature: gene Location: 362919-363185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT635839.1 (922960 bp)
Overview 1 RT 1: 565207-571760 bp Neighborhood of RT #1 [565207, 571795] Relaxase YWFCY TraG-D_C RVT-GII GIIM RteC RibD_C Feature: gene Location: 565207-566457 bp Feature: domain Description: Relaxase Location: 565264-565720 bp Feature: domain Description: Relaxase Location: 5 65 264-5 65 720 bp Feature: gene Location: 566489-568498 bp Feature: domain Description: YWFCY Location: 566498-566675 bp Feature: domain Description: YWFCY Location: 5 66498-5 66675 bp Feature: domain Description: TraG-D_C Location: 567875-568205 bp Feature: domain Description: TraG-D_C Location: 5 67875 -5 68205 bp Feature: gene Location: 568620-570023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568962-569580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 68962-5 695 80 bp Feature: domain Description: GIIM Note: maturase Location: 569637-569844 bp Feature: domain Description: GIIM Note: maturase Location: 5 69637-5 69844 bp Feature: gene Location: 570516-571133 bp Feature: domain Description: RteC Location: 570834-571104 bp Feature: domain Description: RteC Location: 5 70834-5 71104 bp Feature: gene Location: 571373-571795 bp Feature: domain Description: RibD_C Location: 571610-571760 bp Feature: domain Description: RibD_C Location: 5 71610-5 71760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT