myRT

myRT report for GCA_900128505.1_PRJEB18032

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Seq: LT669940.1 (1807516 bp)
Overview 1 RT 1: 220428-224759 bp 2 RT 2: 807572-812348 bp Neighborhood of RT #1 [220428, 224759] RVT-DGRs Neighborhood of RT #2 [807572, 812353] zf-NADH-PPase Nudix_Hydrolase_22 ROK_glcA_fam RVT_N RVT-GII GIIM BltR2 Feature: gene Location: 220428-220934 bp Feature: gene Location: 220945-221157 bp Feature: gene Location: 221176-222231 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 221383-221977 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 221 383-221 977 bp Feature: gene Location: 222255-222575 bp Feature: gene Location: 222666-224759 bp Feature: gene Location: 807572-808096 bp Feature: domain Description: zf-NADH-PPase Location: 807602-807683 bp Feature: domain Description: zf-NADH-PPase Location: 807602-807683 bp Feature: domain Description: Nudix_Hydrolase_22 Location: 807695-808079 bp Feature: domain Description: Nudix_Hydrolase_22 Location: 807695-808079 bp Feature: gene Location: 808183-809148 bp Feature: domain Description: ROK_glcA_fam Location: 808204-809128 bp Feature: domain Description: ROK_glcA_fam Location: 808204-8091 28 bp Feature: gene Location: 809404-811104 bp Feature: domain Description: RVT_N Location: 809467-809710 bp Feature: domain Description: RVT_N Location: 809467-80971 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809755-810415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809755-81 041 5 bp Feature: domain Description: GIIM Note: maturase Location: 810472-810706 bp Feature: domain Description: GIIM Note: maturase Location: 81 0472-81 0706 bp Feature: gene Location: 811205-811594 bp Feature: gene Location: 811868-812353 bp Feature: domain Description: BltR2 Location: 811919-812348 bp Feature: domain Description: BltR2 Location: 81 1 91 9-81 2348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT669941.1 (4509727 bp)
Overview 1 RT 1: 226910-230038 bp 2 RT 2: 1292717-1300072 bp 3 RT 3: 3676559-3679774 bp Neighborhood of RT #1 [226910, 230043] DUF4133 DUF4134 RVT_N RVT-GII GIIM DUF4134 Neighborhood of RT #2 [1292717, 1300119] Avd_like DUF1566 RVT-DGRs DUF4906 BACON BACON BACON BACON BACON BACON DUF1566 DUF1016_N YhcG_C Neighborhood of RT #3 [3676559, 3679818] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Feature: gene Location: 226910-227248 bp Feature: domain Description: DUF4133 Location: 226928-227198 bp Feature: domain Description: DUF4133 Location: 2 2 692 8-2 2 7198 bp Feature: gene Location: 227260-227550 bp Feature: domain Description: DUF4134 Location: 227383-227545 bp Feature: domain Description: DUF4134 Location: 2 2 7383-2 2 7545 bp Feature: gene Location: 227547-229247 bp Feature: domain Description: RVT_N Location: 227610-227853 bp Feature: domain Description: RVT_N Location: 2 2 7610-2 2 7853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227898-228558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 7898-2 2 8558 bp Feature: domain Description: GIIM Note: maturase Location: 228615-228849 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 8615-2 2 8849 bp Feature: gene Location: 229348-229737 bp Feature: gene Location: 229909-230043 bp Feature: domain Description: DUF4134 Location: 229933-230038 bp Feature: domain Description: DUF4134 Location: 2 2 9933-2 30038 bp Feature: gene Location: 1292717-1293226 bp Feature: gene Location: 1293243-1293587 bp Feature: domain Description: Avd_like Location: 1293273-1293576 bp Feature: domain Description: Avd_like Location: 12 932 73-12 93576 bp Feature: gene Location: 1293571-1295181 bp Feature: domain Description: DUF1566 Location: 1293598-1293772 bp Feature: domain Description: DUF1566 Location: 12 93598-12 93772 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1294000-1294753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 94000-12 94753 bp Feature: gene Location: 1295681-1298908 bp Feature: domain Description: DUF4906 Location: 1296152-1296746 bp Feature: domain Description: DUF4906 Location: 12 96152 -12 96746 bp Feature: domain Description: BACON Location: 1296806-1297082 bp Feature: domain Description: BACON Location: 12 96806-12 97082 bp Feature: domain Description: BACON Location: 1297130-1297400 bp Feature: domain Description: BACON Location: 12 97130-12 97400 bp Feature: domain Description: BACON Location: 1297442-1297652 bp Feature: domain Description: BACON Location: 12 97442 -12 97652 bp Feature: domain Description: BACON Location: 1297700-1297994 bp Feature: domain Description: BACON Location: 12 97700-12 97994 bp Feature: domain Description: BACON Location: 1298015-1298291 bp Feature: domain Description: BACON Location: 12 98015-12 982 91 bp Feature: domain Description: BACON Location: 1298339-1298528 bp Feature: domain Description: BACON Location: 12 98339-12 9852 8 bp Feature: domain Description: DUF1566 Location: 1298621-1298897 bp Feature: domain Description: DUF1566 Location: 12 9862 1-12 98897 bp Feature: gene Location: 1299058-1300119 bp Feature: domain Description: DUF1016_N Location: 1299139-1299547 bp Feature: domain Description: DUF1016_N Location: 12 99139-12 99547 bp Feature: domain Description: YhcG_C Location: 1299616-1300072 bp Feature: domain Description: YhcG_C Location: 12 99616-1300072 bp Feature: gene Location: 3676559-3676825 bp Feature: domain Description: DUF4134 Location: 3676718-3676820 bp Feature: domain Description: DUF4134 Location: 3676718-367682 0 bp Feature: gene Location: 3676997-3677386 bp Feature: gene Location: 3677487-3679187 bp Feature: domain Description: RVT_N Location: 3677550-3677793 bp Feature: domain Description: RVT_N Location: 3677550-3677793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677838-3678498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677838-3678498 bp Feature: domain Description: GIIM Note: maturase Location: 3678555-3678789 bp Feature: domain Description: GIIM Note: maturase Location: 3678555-3678789 bp Feature: gene Location: 3679184-3679474 bp Feature: domain Description: DUF4134 Location: 3679307-3679469 bp Feature: domain Description: DUF4134 Location: 3679307-3679469 bp Feature: gene Location: 3679486-3679818 bp Feature: domain Description: DUF4133 Location: 3679504-3679774 bp Feature: domain Description: DUF4133 Location: 3679504-3679774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT669937.1 (2487 bp)
Overview 1 RT 1: 119-2309 bp Neighborhood of RT #1 [119, 2309] RVT_N RVT-GII GIIM Feature: gene Location: 119-1819 bp Feature: domain Description: RVT_N Location: 182-425 bp Feature: domain Description: RVT_N Location: 182-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-113 0 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1421 bp Feature: gene Location: 1920-2309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT