myRT

myRT report for GCA_900129135.1_IMG-taxon_2585428044_annotated_assembly

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Seq: FQVI01000067.1 (3123 bp)
Overview 1 RT 1: 1-2685 bp Neighborhood of RT #1 [1, 2685] RVT-GII PinE Zn_ribbon_recom Recombinase excise Feature: gene Location: 1-180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58-106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58-1 06 bp Feature: gene Location: 188-2233 bp Feature: domain Description: PinE Location: 254-935 bp Feature: domain Description: PinE Location: 254-935 bp Feature: domain Description: Zn_ribbon_recom Location: 1202-1376 bp Feature: domain Description: Zn_ribbon_recom Location: 1 202-1 376 bp Feature: domain Description: Recombinase Location: 1907-2066 bp Feature: domain Description: Recombinase Location: 1 907-2066 bp Feature: domain Description: excise Location: 2072-2153 bp Feature: domain Description: excise Location: 2072-21 53 bp Feature: gene Location: 2365-2685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQVI01000001.1 (572444 bp)
Overview 1 RT 1: 208006-212213 bp Neighborhood of RT #1 [208006, 212236] corrinoid_protein_B12-BD RVT-GII MFS PepP Feature: gene Location: 208006-208641 bp Feature: domain Description: corrinoid_protein_B12-BD Location: 208027-208630 bp Feature: domain Description: corrinoid_protein_B12 -BD Location: 2 0802 7-2 08630 bp Feature: gene Location: 208668-208889 bp Feature: gene Location: 208932-209750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209247-209547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 092 47-2 09547 bp Feature: gene Location: 209832-211106 bp Feature: domain Description: MFS Location: 209934-211041 bp Feature: domain Description: MFS Location: 2 09934-2 11041 bp Feature: gene Location: 211139-212236 bp Feature: domain Description: PepP Location: 211154-212213 bp Feature: domain Description: PepP Location: 2 11154-2 12 2 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQVI01000021.1 (76222 bp)
Overview 1 RT 1: 50926-54019 bp Neighborhood of RT #1 [50926, 54027] ECA_wecE RVT-GII GIIM EamA COG2510 RhaT Feature: gene Location: 50926-52053 bp Feature: domain Description: ECA_wecE Location: 50929-52048 bp Feature: domain Description: ECA_wecE Location: 50929-52048 bp Feature: gene Location: 52147-52290 bp Feature: gene Location: 52395-53225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52401-52737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52401-5273 7 bp Feature: domain Description: GIIM Note: maturase Location: 52794-53004 bp Feature: domain Description: GIIM Note: maturase Location: 52794-53 004 bp Feature: gene Location: 53292-53633 bp Feature: domain Description: EamA Location: 53310-53457 bp Feature: domain Description: EamA Location: 53 3 10-53 457 bp Feature: domain Description: COG2510 Location: 53505-53622 bp Feature: domain Description: COG2510 Location: 53 505-53 622 bp Feature: gene Location: 53626-54027 bp Feature: domain Description: RhaT Location: 53782-54019 bp Feature: domain Description: RhaT Location: 53 782-54019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQVI01000010.1 (144569 bp)
Overview 1 RT 1: 46418-52713 bp Neighborhood of RT #1 [46418, 52724] LDH_2 SfcA RVT-Retrons MhpD glpK Feature: gene Location: 46418-47392 bp Feature: domain Description: LDH_2 Location: 46442-47357 bp Feature: domain Description: LDH_2 Location: 4 64 4 2-4 7357 bp Feature: gene Location: 47405-48568 bp Feature: domain Description: SfcA Location: 47420-48548 bp Feature: domain Description: SfcA Location: 4 74 20-4 854 8 bp Feature: gene Location: 48622-49857 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49042-49591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 904 2-4 9591 bp Feature: gene Location: 50325-51218 bp Feature: domain Description: MhpD Location: 50475-51213 bp Feature: domain Description: MhpD Location: 504 75-51213 bp Feature: gene Location: 51231-52724 bp Feature: domain Description: glpK Location: 51234-52713 bp Feature: domain Description: glpK Location: 51234 -52713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT