myRT

myRT report for GCA_900129235.1_IMG-taxon_2695420937_annotated_assembly

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Seq: FQUV01000014.1 (24071 bp)
Overview 1 RT 1: 19628-24066 bp Neighborhood of RT #1 [19628, 24068] MvaI_BcnI RVT-Retrons AAA_15 Feature: gene Location: 19628-20959 bp Feature: domain Description: MvaI_BcnI Location: 20168-20927 bp Feature: domain Description: MvaI_BcnI Location: 201 68-20927 bp Feature: gene Location: 21062-21904 bp Feature: gene Location: 22086-23018 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22206-22755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22206-22755 bp Feature: gene Location: 23103-24068 bp Feature: domain Description: AAA_15 Location: 23106-24066 bp Feature: domain Description: AAA_1 5 Location: 231 06-24066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MvaI_BcnI (pfam15515), RVT-Retrons, AAA_15 (pfam13175)

Seq: FQUV01000015.1 (14606 bp)
Overview 1 RT 1: 9662-14469 bp Neighborhood of RT #1 [9662, 14603] YeeA TIR_2 RVT-Retrons HTH_XRE Feature: gene Location: 9662-12430 bp Feature: domain Description: YeeA Location: 10475-10793 bp Feature: domain Description: YeeA Location: 10475-10793 bp Feature: gene Location: 12506-13447 bp Feature: domain Description: TIR_2 Location: 12518-12812 bp Feature: domain Description: TIR_2 Location: 12 518-12 812 bp Feature: gene Location: 13468-14358 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13624-14146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1362 4-14146 bp Feature: gene Location: 14355-14603 bp Feature: domain Description: HTH_XRE Location: 14358-14469 bp Feature: domain Description: HTH_XRE Location: 14358-14469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), TIR_2 (pfam13676), RVT-Retrons, HTH_XRE (smart00530)

Seq: FQUV01000009.1 (120960 bp)
Overview 1 RT 1: 1-2649 bp Neighborhood of RT #1 [1, 2649] HTH_XRE RVT-Retrons TIR_2 Feature: gene Location: 1-252 bp Feature: domain Description: HTH_XRE Location: 4-118 bp Feature: domain Description: HTH_XRE Location: 4-118 bp Feature: gene Location: 249-1139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 405-927 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 405-927 bp Feature: gene Location: 1159-2124 bp Feature: domain Description: TIR_2 Location: 1171-1459 bp Feature: domain Description: TIR_2 Location: 1171-1459 bp Feature: gene Location: 2176-2649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, TIR_2 (pfam13676)

Seq: FQUV01000016.1 (13262 bp)
Overview 1 RT 1: 7131-10979 bp Neighborhood of RT #1 [7131, 11062] RVT-AbiP2 INT_C_like_1 Feature: gene Location: 7131-7262 bp Feature: gene Location: 7293-7544 bp Feature: gene Location: 7834-9336 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 8275-8734 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 8275-8734 bp Feature: gene Location: 9550-9732 bp Feature: gene Location: 9791-11062 bp Feature: domain Description: INT_C_like_1 Location: 10568-10979 bp Feature: domain Description: INT_C_like_1 Location: 10568-10979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, INT_C_like_1 (cd01184)