myRT

myRT report for GCA_900130005.1_IMG-taxon_2585428078_annotated_assembly

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Seq: FQXP01000010.1 (152234 bp)
Overview 1 RT 1: 21811-26409 bp Neighborhood of RT #1 [21811, 27059] FieF FieF RVT-Retrons RAYT HNHc Feature: gene Location: 21811-22998 bp Feature: domain Description: FieF Location: 21901-22744 bp Feature: domain Description: FieF Location: 21 901 -22744 bp Feature: domain Description: FieF Location: 22774-22978 bp Feature: domain Description: FieF Location: 22774-22978 bp Feature: gene Location: 23237-24136 bp Feature: gene Location: 24283-25344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24451-25012 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24451 -2501 2 bp Feature: gene Location: 25595-25789 bp Feature: domain Description: RAYT Location: 25601-25781 bp Feature: domain Description: RAYT Location: 25601 -25781 bp Feature: gene Location: 26226-27059 bp Feature: domain Description: HNHc Note: nucleases Location: 26274-26409 bp Feature: domain Description: HNHc Note: nucleases Location: 26274-26409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FieF (COG0053), RVT-Retrons, RAYT (COG1943), HNHc (smart00507)

Seq: FQXP01000008.1 (188938 bp)
Overview 1 RT 1: 11245-18700 bp Neighborhood of RT #1 [11245, 18738] YbjD UvrD UvrD RVT-GII GIIM GIY-YIG_UvrC_Cho PRK06696 Feature: gene Location: 11245-13302 bp Feature: domain Description: YbjD Location: 11248-12700 bp Feature: domain Description: YbjD Location: 112 48-12 700 bp Feature: gene Location: 13307-15172 bp Feature: domain Description: UvrD Location: 13397-14558 bp Feature: domain Description: UvrD Location: 13397-14558 bp Feature: domain Description: UvrD Location: 14753-15077 bp Feature: domain Description: UvrD Location: 14753-15077 bp Feature: gene Location: 15409-16062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15412-15622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15412 -1562 2 bp Feature: domain Description: GIIM Note: maturase Location: 15676-15898 bp Feature: domain Description: GIIM Note: maturase Location: 15676-15898 bp Feature: gene Location: 16149-16937 bp Feature: domain Description: GIY-YIG_UvrC_Cho Location: 16257-16347 bp Feature: domain Description: GIY-YIG_UvrC_Cho Location: 162 57-16347 bp Feature: gene Location: 18070-18738 bp Feature: domain Description: PRK06696 Location: 18097-18700 bp Feature: domain Description: PRK06696 Location: 18097-18700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), UvrD (COG0210), RVT-GII, GIIM (pfam08388), GIY-YIG_UvrC_Cho (cd10434), PRK06696 (uridine kinase; Validated)