myRT

myRT report for GCA_900130125.1_PRJEB18268

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Seq: FQXY01000008.1 (826951 bp)
Overview 1 RT 1: 56726-67148 bp Neighborhood of RT #1 [56726, 67621] TMAO_torS AtoC RVT-GII GIIM RVT-GII GIIM YWFCY SXT_TraD TrwB Relaxase Feature: gene Location: 56726-59098 bp Feature: domain Description: TMAO_torS Location: 57689-58769 bp Feature: domain Description: TMAO_torS Location: 57689-58769 bp Feature: gene Location: 59103-60383 bp Feature: domain Description: AtoC Location: 59106-60378 bp Feature: domain Description: AtoC Location: 591 06-60378 bp Feature: gene Location: 60850-62256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61192-61810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 1 92-61 81 0 bp Feature: domain Description: GIIM Note: maturase Location: 61864-62095 bp Feature: domain Description: GIIM Note: maturase Location: 61 864-62095 bp Feature: gene Location: 62831-64117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63041-63692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63041 -63692 bp Feature: domain Description: GIIM Note: maturase Location: 63770-63977 bp Feature: domain Description: GIIM Note: maturase Location: 63770-63977 bp Feature: gene Location: 64281-66326 bp Feature: domain Description: YWFCY Location: 64287-64464 bp Feature: domain Description: YWFCY Location: 64287-64464 bp Feature: domain Description: SXT_TraD Location: 64887-65124 bp Feature: domain Description: SXT_TraD Location: 64887-651 24 bp Feature: domain Description: TrwB Location: 65367-66000 bp Feature: domain Description: TrwB Location: 65367-66000 bp Feature: gene Location: 66365-67621 bp Feature: domain Description: Relaxase Location: 66488-67148 bp Feature: domain Description: Relaxase Location: 66488-671 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQXY01000009.1 (1210324 bp)
Overview 1 RT 1: 31098-34629 bp 2 RT 2: 765846-769013 bp Neighborhood of RT #1 [31098, 34629] DUF1566 Avd_like RVT-DGRs Neighborhood of RT #2 [765846, 769042] RVT-DGRs HTH_XRE Gp49 Feature: gene Location: 31098-31907 bp Feature: domain Description: DUF1566 Location: 31629-31878 bp Feature: domain Description: DUF1566 Location: 3162 9-31878 bp Feature: gene Location: 32054-32461 bp Feature: domain Description: Avd_like Location: 32087-32396 bp Feature: domain Description: Avd_like Location: 32 087-32 396 bp Feature: gene Location: 32476-33897 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32851-33553 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32 851-33553 bp Feature: gene Location: 33860-34138 bp Feature: gene Location: 34336-34629 bp Feature: gene Location: 765846-766082 bp Feature: gene Location: 766089-766571 bp Feature: gene Location: 766640-768130 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 767033-767630 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 767033-767630 bp Feature: gene Location: 768382-768693 bp Feature: domain Description: HTH_XRE Location: 768496-768652 bp Feature: domain Description: HTH_XRE Location: 768496-768652 bp Feature: gene Location: 768698-769042 bp Feature: domain Description: Gp49 Location: 768752-769013 bp Feature: domain Description: Gp49 Location: 768752 -769013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQXY01000011.1 (1852904 bp)
Overview 1 RT 1: 722089-734158 bp 2 RT 2: 963372-966857 bp 3 RT 3: 1299934-1305088 bp Neighborhood of RT #1 [722089, 734283] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF3320 rpsA Neighborhood of RT #2 [963372, 966913] DUF1566 Avd_like RVT-DGRs Phage_holin_4_1 Neighborhood of RT #3 [1299934, 1305102] Bac_Flav_CT_G Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 722089-722664 bp Feature: gene Location: 722834-725041 bp Feature: gene Location: 725248-726381 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 725572-726118 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 725572-726118 bp Feature: gene Location: 726415-732375 bp Feature: domain Description: DUF4011 Location: 727630-728143 bp Feature: domain Description: DUF4011 Location: 72763 0-728143 bp Feature: domain Description: DEXXQc_SF1 Location: 728482-729178 bp Feature: domain Description: DEXXQc_SF1 Location: 728482-729178 bp Feature: domain Description: DEXXQc_SF1 Location: 729913-730669 bp Feature: domain Description: DEXXQc_SF1 Location: 729913 -73 0669 bp Feature: domain Description: SF1_C_Upf1 Location: 730678-731188 bp Feature: domain Description: SF1_C_Upf1 Location: 73 0678-73 1188 bp Feature: domain Description: MTES_1575 Location: 731341-731626 bp Feature: domain Description: MTES_1575 Location: 73 13 41-73 1626 bp Feature: domain Description: DUF3320 Location: 731881-732025 bp Feature: domain Description: DUF3 3 20 Location: 73 1881-73 2025 bp Feature: gene Location: 732487-734283 bp Feature: domain Description: rpsA Location: 732556-734158 bp Feature: domain Description: rpsA Location: 73 2556-73 4158 bp Feature: gene Location: 963372-964181 bp Feature: domain Description: DUF1566 Location: 963903-964152 bp Feature: domain Description: DUF1566 Location: 963 903 -964152 bp Feature: gene Location: 964328-964735 bp Feature: domain Description: Avd_like Location: 964361-964670 bp Feature: domain Description: Avd_like Location: 9643 61-964670 bp Feature: gene Location: 964750-966171 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 965125-965827 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 965125-965827 bp Feature: gene Location: 966134-966412 bp Feature: gene Location: 966467-966913 bp Feature: domain Description: Phage_holin_4_1 Location: 966548-966857 bp Feature: domain Description: Phage_holin_4_1 Location: 966548-966857 bp Feature: gene Location: 1299934-1300170 bp Feature: domain Description: Bac_Flav_CT_G Location: 1299937-1300150 bp Feature: domain Description: Bac_Flav_CT_G Location: 129993 7-13 00150 bp Feature: gene Location: 1300226-1300375 bp Feature: domain Description: Bac_Flav_CT_G Location: 1300238-1300373 bp Feature: domain Description: Bac_Flav_CT_G Location: 13 0023 8-13 003 73 bp Feature: gene Location: 1300468-1302279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300732-1301554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 0073 2-13 01554 bp Feature: domain Description: Intron_maturas2 Location: 1301629-1301956 bp Feature: domain Description: Intron_maturas2 Location: 13 01629-13 01956 bp Feature: domain Description: HNHc Note: nucleases Location: 1302097-1302250 bp Feature: domain Description: HNHc Note: nucleases Location: 13 02097-13 02250 bp Feature: gene Location: 1302625-1302798 bp Feature: gene Location: 1302826-1305102 bp Feature: domain Description: Bac_Flav_CT_G Location: 1303009-1305088 bp Feature: domain Description: Bac_Flav_CT_G Location: 13 03 009-13 05088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FQXY01000006.1 (333079 bp)
Overview 1 RT 1: 47210-53508 bp Neighborhood of RT #1 [47210, 53633] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 SesA Feature: gene Location: 47210-47542 bp Feature: domain Description: DUF4133 Location: 47228-47498 bp Feature: domain Description: DUF4 133 Location: 4 7228-4 74 98 bp Feature: gene Location: 47539-49938 bp Feature: domain Description: Bac_Flav_CT_G Location: 47542-49930 bp Feature: domain Description: Bac_Flav_CT_G Location: 4 754 2-4 9930 bp Feature: gene Location: 50507-52330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50771-51593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50771-51593 bp Feature: domain Description: Intron_maturas2 Location: 51767-52010 bp Feature: domain Description: Intron_maturas2 Location: 51767-52010 bp Feature: domain Description: HNHc Note: nucleases Location: 52121-52292 bp Feature: domain Description: HNHc Note: nucleases Location: 52121-52292 bp Feature: gene Location: 52600-52980 bp Feature: domain Description: DUF3876 Location: 52681-52945 bp Feature: domain Description: DUF3876 Location: 52681-5294 5 bp Feature: gene Location: 53004-53633 bp Feature: domain Description: DUF4141 Location: 53019-53172 bp Feature: domain Description: DUF4 14 1 Location: 53019-53172 bp Feature: domain Description: SesA Location: 53178-53508 bp Feature: domain Description: SesA Location: 53178-53508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT