myRT

myRT report for GCA_900130455.1_10625_5_82

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Seq: FSAB01000018.1 (188162 bp)
Overview 1 RT 1: 27756-36747 bp Neighborhood of RT #1 [27756, 36770] RecB RVT-GII Intron_maturas2 HNHc DEXQc_UvrD PDDEXK_1 Feature: gene Location: 27756-28079 bp Feature: gene Location: 28312-30426 bp Feature: domain Description: RecB Location: 28360-30358 bp Feature: domain Description: RecB Location: 28360-30358 bp Feature: gene Location: 30573-32381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30837-31668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30837-31 668 bp Feature: domain Description: Intron_maturas2 Location: 31857-32037 bp Feature: domain Description: Intron_maturas2 Location: 31 857-32037 bp Feature: domain Description: HNHc Note: nucleases Location: 32205-32364 bp Feature: domain Description: HNHc Note: nucleases Location: 32205-32364 bp Feature: gene Location: 32968-34065 bp Feature: domain Description: DEXQc_UvrD Location: 32989-34054 bp Feature: domain Description: DEXQc_UvrD Location: 32989-34054 bp Feature: gene Location: 34062-36770 bp Feature: domain Description: PDDEXK_1 Location: 35931-36747 bp Feature: domain Description: PDDEXK_1 Location: 35931 -36747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecB (COG4998), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXQc_UvrD (cd17932), PDDEXK_1 (pfam12705)

Seq: FSAB01000080.1 (17626 bp)
Overview 1 RT 1: 960-5382 bp Neighborhood of RT #1 [960, 5411] VOC_like RVT-GII GIIM His_Phos_1 Tas Feature: gene Location: 960-1118 bp Feature: gene Location: 1233-1418 bp Feature: domain Description: VOC_like Location: 1242-1341 bp Feature: domain Description: VOC_like Location: 12 42 -1341 bp Feature: gene Location: 1620-3062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1848-2472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1848-2 472 bp Feature: domain Description: GIIM Note: maturase Location: 2547-2658 bp Feature: domain Description: GIIM Note: maturase Location: 2 547-2 658 bp Feature: gene Location: 3769-4341 bp Feature: domain Description: His_Phos_1 Location: 3772-4297 bp Feature: domain Description: His_Phos_1 Location: 3772 -42 97 bp Feature: gene Location: 4416-5411 bp Feature: domain Description: Tas Location: 4419-5382 bp Feature: domain Description: Tas Location: 4419-5382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), RVT-GII, GIIM (pfam08388), His_Phos_1 (pfam00300), Tas (COG0667)

Seq: FSAB01000005.1 (404853 bp)
Overview 1 RT 1: 136246-140572 bp Neighborhood of RT #1 [136246, 140583] PRK13927 PRK00024 RVT-UNC RadC Maf Feature: gene Location: 136246-137268 bp Feature: domain Description: PRK13927 Location: 136258-137251 bp Feature: domain Description: PRK13 927 Location: 13 6258-13 7251 bp Feature: gene Location: 137446-137613 bp Feature: domain Description: PRK00024 Location: 137476-137608 bp Feature: domain Description: PRK00024 Location: 13 7476-13 7608 bp Feature: gene Location: 137691-138920 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 137937-138453 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 13 793 7-13 8453 bp Feature: gene Location: 139420-139980 bp Feature: domain Description: RadC Location: 139444-139969 bp Feature: domain Description: RadC Location: 13 9444-13 9969 bp Feature: gene Location: 140026-140583 bp Feature: domain Description: Maf Location: 140029-140572 bp Feature: domain Description: Maf Location: 140029-140572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13927 (rod shape-determining protein MreB; Provisional), PRK00024 (DNA repair protein RadC), RVT-GII/RVT-UG17/RVT-DGRs/RVT-UG3(RVT-UNC), RadC (pfam04002), Maf (pfam02545)