myRT

myRT report for GCA_900142225.1_IMG-taxon_2585428174_annotated_assembly

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Seq: FRAD01000007.1 (161114 bp)
Overview 1 RT 1: 66712-68552 bp Neighborhood of RT #1 [66712, 68552] RVT-CRISPR-like DUF772 DDE_Tnp_1_6 Feature: gene Location: 66712-66888 bp Feature: gene Location: 67023-67226 bp Feature: gene Location: 67447-67575 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 67456-67573 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 67456-67573 bp Feature: gene Location: 67850-68413 bp Feature: domain Description: DUF772 Location: 67856-68033 bp Feature: domain Description: DUF772 Location: 67856-68033 bp Feature: domain Description: DDE_Tnp_1_6 Location: 68276-68399 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 68276-68399 bp Feature: gene Location: 68424-68552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751)

Seq: FRAD01000009.1 (129165 bp)
Overview 1 RT 1: 8001-12639 bp Neighborhood of RT #1 [8001, 12659] Dam RVT-GII GIIM group_II_RT_mat Recombinase Zn_ribbon_recom Feature: gene Location: 8001-8504 bp Feature: gene Location: 8569-9513 bp Feature: domain Description: Dam Location: 8575-9328 bp Feature: domain Description: Dam Location: 8575-932 8 bp Feature: gene Location: 10132-11376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10336-10993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10336-10993 bp Feature: domain Description: GIIM Note: maturase Location: 11074-11302 bp Feature: domain Description: GIIM Note: maturase Location: 11074-11302 bp Feature: gene Location: 11693-11968 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11699-11876 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11699-11876 bp Feature: gene Location: 12252-12659 bp Feature: domain Description: Recombinase Location: 12258-12498 bp Feature: domain Description: Recombinase Location: 12 2 58-12 498 bp Feature: domain Description: Zn_ribbon_recom Location: 12576-12639 bp Feature: domain Description: Zn_ribbon_recom Location: 12 576-12 639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)