myRT

myRT report for GCA_900142265.1_IMG-taxon_2585428190_annotated_assembly

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Seq: FRAH01000013.1 (54769 bp)
Overview 1 RT 1: 49818-54754 bp Neighborhood of RT #1 [49818, 54768] PrgI RVT-GII Intron_maturas2 HNHc Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 49818-50234 bp Feature: domain Description: PrgI Location: 49833-50106 bp Feature: domain Description: PrgI Location: 49833-501 06 bp Feature: gene Location: 50257-50559 bp Feature: gene Location: 50635-52467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50899-51730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50899-51 730 bp Feature: domain Description: Intron_maturas2 Location: 51802-52117 bp Feature: domain Description: Intron_maturas2 Location: 51 802-521 1 7 bp Feature: domain Description: HNHc Note: nucleases Location: 52267-52438 bp Feature: domain Description: HNHc Note: nucleases Location: 52267-52438 bp Feature: gene Location: 53044-53715 bp Feature: gene Location: 53971-54768 bp Feature: domain Description: Recombinase Location: 53977-54067 bp Feature: domain Description: Recombinase Location: 53977-54067 bp Feature: domain Description: Zn_ribbon_recom Location: 54100-54274 bp Feature: domain Description: Zn_ribbon_recom Location: 541 00-54274 bp Feature: domain Description: DUF4368 Location: 54553-54754 bp Feature: domain Description: DUF4368 Location: 54553-54754 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: FRAH01000057.1 (23683 bp)
Overview 1 RT 1: 6819-16380 bp Neighborhood of RT #1 [6819, 17000] COG5015 Cu_amine_oxidN1 COG4922 COG4922 RVT-GII Intron_maturas2 HNHc DUF3852 TED COG4932 COG4932 COG4932 SpaA COG4932 Feature: gene Location: 6819-7220 bp Feature: domain Description: COG5015 Location: 6822-7206 bp Feature: domain Description: COG5015 Location: 682 2 -72 06 bp Feature: gene Location: 7240-8364 bp Feature: domain Description: Cu_amine_oxidN1 Location: 7354-7567 bp Feature: domain Description: Cu_amine_oxidN1 Location: 7354-7567 bp Feature: domain Description: COG4922 Location: 7627-7918 bp Feature: domain Description: COG492 2 Location: 762 7-7918 bp Feature: domain Description: COG4922 Location: 7984-8332 bp Feature: domain Description: COG492 2 Location: 7984-8332 bp Feature: gene Location: 8749-10566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9013-9835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9013-9835 bp Feature: domain Description: Intron_maturas2 Location: 9907-10216 bp Feature: domain Description: Intron_maturas2 Location: 9907-102 16 bp Feature: domain Description: HNHc Note: nucleases Location: 10363-10537 bp Feature: domain Description: HNHc Note: nucleases Location: 10363-10537 bp Feature: gene Location: 11147-11410 bp Feature: domain Description: DUF3852 Location: 11162-11387 bp Feature: domain Description: DUF3852 Location: 11162 -11387 bp Feature: gene Location: 11499-17000 bp Feature: domain Description: TED Location: 11730-12027 bp Feature: domain Description: TED Location: 11730-12 02 7 bp Feature: domain Description: COG4932 Location: 12513-13239 bp Feature: domain Description: COG4932 Location: 12 513-132 39 bp Feature: domain Description: COG4932 Location: 13311-14067 bp Feature: domain Description: COG4932 Location: 13311-14067 bp Feature: domain Description: COG4932 Location: 14172-15348 bp Feature: domain Description: COG4932 Location: 14172 -15348 bp Feature: domain Description: SpaA Location: 15384-15579 bp Feature: domain Description: SpaA Location: 15384-15579 bp Feature: domain Description: COG4932 Location: 15645-16380 bp Feature: domain Description: COG4932 Location: 15645-16380 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: FRAH01000008.1 (72100 bp)
Overview 1 RT 1: 47107-58516 bp Neighborhood of RT #1 [47107, 58530] DUF3848 DUF3849 COG4646 KOG1000 RVT-GII GIIM HNHc YtxK COG4646 Feature: gene Location: 47107-47916 bp Feature: domain Description: DUF3848 Location: 47131-47401 bp Feature: domain Description: DUF3 848 Location: 4713 1-47401 bp Feature: domain Description: DUF3849 Location: 47440-47812 bp Feature: domain Description: DUF3 849 Location: 47440-47812 bp Feature: gene Location: 47919-50000 bp Feature: domain Description: COG4646 Location: 47985-48564 bp Feature: domain Description: COG4646 Location: 47985-48564 bp Feature: domain Description: KOG1000 Location: 48996-49200 bp Feature: domain Description: KOG1000 Location: 48996-49200 bp Feature: gene Location: 50097-52022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50421-51135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50421-5113 5 bp Feature: domain Description: GIIM Note: maturase Location: 51249-51447 bp Feature: domain Description: GIIM Note: maturase Location: 51249-51447 bp Feature: domain Description: HNHc Note: nucleases Location: 51774-51945 bp Feature: domain Description: HNHc Note: nucleases Location: 51774-51945 bp Feature: gene Location: 52299-52478 bp Feature: gene Location: 52750-58530 bp Feature: domain Description: YtxK Location: 55729-56362 bp Feature: domain Description: YtxK Location: 55729-563 62 bp Feature: domain Description: COG4646 Location: 56509-58516 bp Feature: domain Description: COG4646 Location: 56509-58516 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: FRAH01000010.1 (65825 bp)
Overview 1 RT 1: 52185-58088 bp Neighborhood of RT #1 [52185, 58177] RlaP RtcB RVT-GII Intron_maturas2 HNHc PRK09588 DUF2828 DUF2828 Feature: gene Location: 52185-52943 bp Feature: domain Description: RlaP Location: 52188-52926 bp Feature: domain Description: RlaP Location: 52188-52926 bp Feature: gene Location: 52912-53838 bp Feature: domain Description: RtcB Location: 53014-53761 bp Feature: domain Description: RtcB Location: 53014 -53761 bp Feature: gene Location: 53865-55664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54129-54951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 129-54 951 bp Feature: domain Description: Intron_maturas2 Location: 55029-55320 bp Feature: domain Description: Intron_maturas2 Location: 55029-55320 bp Feature: domain Description: HNHc Note: nucleases Location: 55491-55641 bp Feature: domain Description: HNHc Note: nucleases Location: 554 91-5564 1 bp Feature: gene Location: 56222-56686 bp Feature: domain Description: PRK09588 Location: 56243-56654 bp Feature: domain Description: PRK09588 Location: 5624 3-56654 bp Feature: gene Location: 56708-58177 bp Feature: domain Description: DUF2828 Location: 56753-57023 bp Feature: domain Description: DUF2828 Location: 56753-57023 bp Feature: domain Description: DUF2828 Location: 57200-58088 bp Feature: domain Description: DUF2828 Location: 57200-58088 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: FRAH01000111.1 (7481 bp)
Overview 1 RT 1: 46-4789 bp Neighborhood of RT #1 [46, 4789] Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 46-927 bp Feature: domain Description: Spr Location: 634-910 bp Feature: domain Description: Spr Location: 634-910 bp Feature: gene Location: 1087-1215 bp Feature: gene Location: 1547-3343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2624 bp Feature: domain Description: Intron_maturas2 Location: 2690-2990 bp Feature: domain Description: Intron_maturas2 Location: 2690-2990 bp Feature: domain Description: HNHc Note: nucleases Location: 3164-3317 bp Feature: domain Description: HNHc Note: nucleases Location: 3164-3317 bp Feature: gene Location: 4322-4495 bp Feature: gene Location: 4517-4789 bp Sorry, your browser does not support inline SVG.
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