myRT

myRT report for GCA_900142815.1_IMG-taxon_2687453679_annotated_assembly

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Seq: FRCG01000017.1 (29612 bp)
Overview 1 RT 1: 8226-18280 bp Neighborhood of RT #1 [8226, 18489] STN ligand_gated_channel Ntn_CA RVT-GII GIIM GH130 GT4_mannosyltransferase-like PS_pyruv_trans Feature: gene Location: 8226-11060 bp Feature: domain Description: STN Location: 8406-8532 bp Feature: domain Description: STN Location: 8406-8532 bp Feature: domain Description: ligand_gated_channel Location: 8724-11055 bp Feature: domain Description: ligand_gated_channel Location: 8724-1 1 055 bp Feature: gene Location: 11122-13227 bp Feature: domain Description: Ntn_CA Location: 11230-13177 bp Feature: domain Description: Ntn_CA Location: 1 1 230-1 31 77 bp Feature: gene Location: 13416-14624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13593-14256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3593-1 4256 bp Feature: domain Description: GIIM Note: maturase Location: 14328-14541 bp Feature: domain Description: GIIM Note: maturase Location: 1 4328-1 4541 bp Feature: gene Location: 15496-16446 bp Feature: domain Description: GH130 Location: 15589-16399 bp Feature: domain Description: GH1 30 Location: 1 5589-1 6399 bp Feature: gene Location: 16450-18489 bp Feature: domain Description: GT4_mannosyltransferase-like Location: 16597-17470 bp Feature: domain Description: GT4_mannosyltransferase-like Location: 1 6597-1 7470 bp Feature: domain Description: PS_pyruv_trans Location: 17944-18280 bp Feature: domain Description: PS_pyruv_trans Location: 1 7944-1 8280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STN (smart00965), ligand_gated_channel (cd01347), Ntn_CA (cd01936), RVT-GII, GIIM (pfam08388), GH130 (cd18615), GT4_mannosyltransferase-like (cd03822), PS_pyruv_trans (pfam04230)

Seq: FRCG01000026.1 (9462 bp)
Overview 1 RT 1: 422-4593 bp Neighborhood of RT #1 [422, 4593] RVT-UG8 Feature: gene Location: 422-580 bp Feature: gene Location: 626-844 bp Feature: gene Location: 2144-4114 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2666-3110 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 666-3110 bp Feature: gene Location: 4218-4373 bp Feature: gene Location: 4456-4593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8