myRT

myRT report for GCA_900142955.1_IMG-taxon_2588253509_annotated_assembly

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Seq: FRCP01000005.1 (672632 bp)
Overview 1 RT 1: 622519-626947 bp Neighborhood of RT #1 [622519, 626961] PRK10219 AraC_E_bind RVT-GII GIIM YotD Rubrerythrin_like DltE DltE Feature: gene Location: 622519-623382 bp Feature: domain Description: PRK10219 Location: 622540-622828 bp Feature: domain Description: PRK1 021 9 Location: 622540-622828 bp Feature: domain Description: AraC_E_bind Location: 622906-623365 bp Feature: domain Description: AraC_E_bind Location: 622906-623365 bp Feature: gene Location: 623502-623630 bp Feature: gene Location: 624012-624857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624018-624417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62401 8-62441 7 bp Feature: domain Description: GIIM Note: maturase Location: 624468-624693 bp Feature: domain Description: GIIM Note: maturase Location: 624468-624693 bp Feature: gene Location: 625339-625881 bp Feature: domain Description: YotD Location: 625348-625441 bp Feature: domain Description: YotD Location: 625348-625441 bp Feature: domain Description: Rubrerythrin_like Location: 625510-625876 bp Feature: domain Description: Rubrerythrin_like Location: 62551 0-625876 bp Feature: gene Location: 626074-626961 bp Feature: domain Description: DltE Location: 626080-626227 bp Feature: domain Description: DltE Location: 626080-626227 bp Feature: domain Description: DltE Location: 626371-626947 bp Feature: domain Description: DltE Location: 626371 -626947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10219 (superoxide response transcriptional regulator SoxS), AraC_E_bind (smart00871), RVT-GII, GIIM (pfam08388), YotD (COG1592), Rubrerythrin_like (cd01046), DltE (COG3967)

Seq: FRCP01000022.1 (117873 bp)
Overview 1 RT 1: 28687-39819 bp Neighborhood of RT #1 [28687, 39819] YtxK COG4646 KOG0390 RVT-GII Intron_maturas2 Feature: gene Location: 28687-29235 bp Feature: gene Location: 29301-36188 bp Feature: domain Description: YtxK Location: 32055-32826 bp Feature: domain Description: YtxK Location: 32 055-32 82 6 bp Feature: domain Description: COG4646 Location: 32877-35451 bp Feature: domain Description: COG4646 Location: 32 877-35451 bp Feature: domain Description: KOG0390 Location: 35820-36081 bp Feature: domain Description: KOG0390 Location: 3582 0-36081 bp Feature: gene Location: 36805-38631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37075-37909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37075-37909 bp Feature: domain Description: Intron_maturas2 Location: 37987-38290 bp Feature: domain Description: Intron_maturas2 Location: 37987-382 90 bp Feature: gene Location: 38726-39484 bp Feature: gene Location: 39484-39819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT-GII, Intron_maturas2 (pfam01348)

Seq: FRCP01000006.1 (467162 bp)
Overview 1 RT 1: 441723-447890 bp Neighborhood of RT #1 [441723, 447901] RVT-GII GIIM GT35_Glycogen_Phosphorylase YvyF Feature: gene Location: 441723-442340 bp Feature: gene Location: 442439-443143 bp Feature: gene Location: 443445-444434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443634-444018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 63 4-444018 bp Feature: domain Description: GIIM Note: maturase Location: 444075-444279 bp Feature: domain Description: GIIM Note: maturase Location: 444075-444279 bp Feature: gene Location: 444925-447381 bp Feature: domain Description: GT35_Glycogen_Phosphorylase Location: 444955-447355 bp Feature: domain Description: GT3 5_Glycogen_Phosphorylase Location: 444955-4473 55 bp Feature: gene Location: 447455-447901 bp Feature: domain Description: YvyF Location: 447497-447890 bp Feature: domain Description: YvyF Location: 447497-447890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GT35_Glycogen_Phosphorylase (cd04300), YvyF (TIGR03826)

Seq: FRCP01000007.1 (358103 bp)
Overview 1 RT 1: 286923-291458 bp Neighborhood of RT #1 [286923, 291466] AraC_E_bind RVT-GII GIIM GIIM ArsA ArsA_HSP20 Feature: gene Location: 286923-287372 bp Feature: gene Location: 287406-287873 bp Feature: domain Description: AraC_E_bind Location: 287424-287865 bp Feature: domain Description: AraC_E_bind Location: 2874 24 -287865 bp Feature: gene Location: 288137-289573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288365-288989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288365-288989 bp Feature: domain Description: GIIM Note: maturase Location: 289064-289178 bp Feature: domain Description: GIIM Note: maturase Location: 289064 -289178 bp Feature: domain Description: GIIM Note: maturase Location: 289247-289328 bp Feature: domain Description: GIIM Note: maturase Location: 28924 7-289328 bp Feature: gene Location: 289827-290069 bp Feature: gene Location: 290303-291466 bp Feature: domain Description: ArsA Location: 290309-291194 bp Feature: domain Description: ArsA Location: 290309-291194 bp Feature: domain Description: ArsA_HSP20 Location: 291275-291458 bp Feature: domain Description: ArsA_HSP20 Location: 291275-2914 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC_E_bind (smart00871), RVT-GII, GIIM (pfam08388), ArsA (COG0003), ArsA_HSP20 (pfam17886)

Seq: FRCP01000026.1 (69047 bp)
Overview 1 RT 1: 5001-12550 bp Neighborhood of RT #1 [5001, 12550] RVT-UG5 Feature: gene Location: 5001-5777 bp Feature: gene Location: 5851-7056 bp Feature: gene Location: 7163-10186 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7670-8189 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7670-8189 bp Feature: gene Location: 10318-11133 bp Feature: gene Location: 11213-12550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5