myRT

myRT report for GCA_900143045.1_IMG-taxon_2642422586_annotated_assembly

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Seq: FRCV01000011.1 (79237 bp)
Overview 1 RT 1: 13087-18159 bp Neighborhood of RT #1 [13087, 18269] RnaY fxsA RVT-GII GIIM DUF1670 DUF1670 Feature: gene Location: 13087-13764 bp Feature: domain Description: RnaY Location: 13129-13459 bp Feature: domain Description: RnaY Location: 1 31 29-1 3459 bp Feature: gene Location: 13807-14304 bp Feature: domain Description: fxsA Location: 13819-14293 bp Feature: domain Description: fxsA Location: 1 381 9-1 4293 bp Feature: gene Location: 14464-15570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14629-15250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4629-1 5250 bp Feature: domain Description: GIIM Note: maturase Location: 15295-15487 bp Feature: domain Description: GIIM Note: maturase Location: 1 5295-1 5487 bp Feature: gene Location: 16678-17451 bp Feature: domain Description: DUF1670 Location: 16744-17404 bp Feature: domain Description: DUF1 670 Location: 1 6744-1 7404 bp Feature: gene Location: 17448-18269 bp Feature: domain Description: DUF1670 Location: 17553-18159 bp Feature: domain Description: DUF1 670 Location: 1 7553-1 81 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRCV01000003.1 (158155 bp)
Overview 1 RT 1: 54388-61581 bp Neighborhood of RT #1 [54388, 61613] GIY-YIG_COG1833 pcrA RVT-GII Intron_maturas2 HNHc pcrA ligA Feature: gene Location: 54388-54831 bp Feature: domain Description: GIY-YIG_COG1833 Location: 54412-54742 bp Feature: domain Description: GIY-YIG_COG1833 Location: 54412 -54742 bp Feature: gene Location: 54862-55635 bp Feature: domain Description: pcrA Location: 54883-55624 bp Feature: domain Description: pcrA Location: 54883-5562 4 bp Feature: gene Location: 56224-58068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56488-57325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56488-5732 5 bp Feature: domain Description: Intron_maturas2 Location: 57394-57760 bp Feature: domain Description: Intron_maturas2 Location: 57394-57760 bp Feature: domain Description: HNHc Note: nucleases Location: 57880-58039 bp Feature: domain Description: HNHc Note: nucleases Location: 57880-58039 bp Feature: gene Location: 58260-59570 bp Feature: domain Description: pcrA Location: 58263-59562 bp Feature: domain Description: pcrA Location: 582 63-59562 bp Feature: gene Location: 59583-61613 bp Feature: domain Description: ligA Location: 59601-61581 bp Feature: domain Description: ligA Location: 59601-61581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRCV01000022.1 (39325 bp)
Overview 1 RT 1: 21159-26271 bp Neighborhood of RT #1 [21159, 26282] Cas2_I_II_III Cas1_I-II-III RVT-GII GIIM Cas6b_N Cas6b_C cas_TM1807_csm5 cas_TM1807_csm5 Feature: gene Location: 21159-21437 bp Feature: domain Description: Cas2_I_II_III Location: 21171-21402 bp Feature: domain Description: Cas2_I_II_III Location: 21171-21402 bp Feature: gene Location: 21438-22427 bp Feature: domain Description: Cas1_I-II-III Location: 21447-22392 bp Feature: domain Description: Cas1_I-II-III Location: 21447-223 92 bp Feature: gene Location: 22604-24052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22988-23606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22988-23 606 bp Feature: domain Description: GIIM Note: maturase Location: 23657-23888 bp Feature: domain Description: GIIM Note: maturase Location: 23 657-23 888 bp Feature: gene Location: 24499-25158 bp Feature: domain Description: Cas6b_N Location: 24502-24808 bp Feature: domain Description: Cas6b_N Location: 24502-24808 bp Feature: domain Description: Cas6b_C Location: 24820-25153 bp Feature: domain Description: Cas6b_C Location: 24820-25153 bp Feature: gene Location: 25227-26282 bp Feature: domain Description: cas_TM1807_csm5 Location: 25239-25641 bp Feature: domain Description: cas_TM1807_csm5 Location: 2523 9-25641 bp Feature: domain Description: cas_TM1807_csm5 Location: 25686-26271 bp Feature: domain Description: cas_TM1807_csm5 Location: 25686-26271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT