myRT

myRT report for GCA_900143075.1_IMG-taxon_2617270779_annotated_assembly

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Seq: FRCY01000009.1 (194251 bp)
Overview 1 RT 1: 1-3250 bp Neighborhood of RT #1 [1, 3279] RVT-GII GIIM integrase_gron PAD_porph Feature: gene Location: 1-705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-235 bp Feature: domain Description: GIIM Note: maturase Location: 310-520 bp Feature: domain Description: GIIM Note: maturase Location: 31 0-520 bp Feature: gene Location: 1424-1963 bp Feature: domain Description: integrase_gron Location: 1769-1961 bp Feature: domain Description: integrase_gron Location: 1 769-1 961 bp Feature: gene Location: 2062-3279 bp Feature: domain Description: PAD_porph Location: 2191-3250 bp Feature: domain Description: PAD_porph Location: 21 91 -3250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249), PAD_porph (pfam04371)

Seq: FRCY01000004.1 (497572 bp)
Overview 1 RT 1: 1-2099 bp Neighborhood of RT #1 [1, 2965] RVT-GII GIIM DUF4062 Feature: gene Location: 1-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: domain Description: GIIM Note: maturase Location: 877-1039 bp Feature: domain Description: GIIM Note: maturase Location: 877-1039 bp Feature: gene Location: 1402-1770 bp Feature: gene Location: 1790-2965 bp Feature: domain Description: DUF4062 Location: 1820-2099 bp Feature: domain Description: DUF4062 Location: 182 0-2 099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4062 (pfam13271)

Seq: FRCY01000018.1 (125202 bp)
Overview 1 RT 1: 1-1439 bp Neighborhood of RT #1 [1, 1459] RVT-GII GIIM HEPN_MAE_28990 Feature: gene Location: 1-498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-23 5 bp Feature: domain Description: GIIM Note: maturase Location: 310-493 bp Feature: domain Description: GIIM Note: maturase Location: 3 10-493 bp Feature: gene Location: 526-738 bp Feature: gene Location: 827-1459 bp Feature: domain Description: HEPN_MAE_28990 Location: 857-1439 bp Feature: domain Description: HEPN_MAE_28990 Location: 857-143 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HEPN_MAE_28990 (pfam18737)

Seq: FRCY01000002.1 (577904 bp)
Overview 1 RT 1: 2-1619 bp Neighborhood of RT #1 [2, 1619] RVT-GII group_II_RT_mat Feature: gene Location: 2-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-224 bp Feature: gene Location: 623-1027 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 650-806 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 650-806 bp Feature: gene Location: 1113-1619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)