myRT

myRT report for GCA_900143515.1_IMG-taxon_2630968262_annotated_assembly

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Seq: FSQT01000001.1 (2906689 bp)
Overview 1 RT 1: 284593-289371 bp 2 RT 2: 482153-486668 bp Neighborhood of RT #1 [284593, 289964] LGT_LGT_LGT_TIGR03299 RVT_N RVT-GII GIIM HNH DUF932 HTH_IclR HTH_IclR Neighborhood of RT #2 [482153, 486668] KOG3706 RVT-UG22 Feature: gene Location: 284593-284937 bp Feature: gene Location: 285101-285409 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 285104-285401 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 2851 04-285401 bp Feature: gene Location: 285577-287406 bp Feature: domain Description: RVT_N Location: 285643-285889 bp Feature: domain Description: RVT_N Location: 285643-285889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285937-286588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285937-286588 bp Feature: domain Description: GIIM Note: maturase Location: 286639-286873 bp Feature: domain Description: GIIM Note: maturase Location: 286639-286873 bp Feature: domain Description: HNH Note: nucleases Location: 287209-287299 bp Feature: domain Description: HNH Note: nucleases Location: 287209-287299 bp Feature: gene Location: 288061-288606 bp Feature: domain Description: DUF932 Location: 288328-288595 bp Feature: domain Description: DUF932 Location: 288328-288595 bp Feature: gene Location: 288684-289964 bp Feature: domain Description: HTH_IclR Location: 288720-288837 bp Feature: domain Description: HTH_IclR Location: 288720-288837 bp Feature: domain Description: HTH_IclR Location: 289275-289371 bp Feature: domain Description: HTH_IclR Location: 289275-289371 bp Feature: gene Location: 482153-483055 bp Feature: domain Description: KOG3706 Location: 482372-482993 bp Feature: domain Description: KOG3706 Location: 482372-482993 bp Feature: gene Location: 483562-483696 bp Feature: gene Location: 483905-485332 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 484040-484559 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 484040-484559 bp Feature: gene Location: 485343-485876 bp Feature: gene Location: 486273-486668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LGT_LGT_LGT_TIGR03299, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF932 (pfam06067), HTH_IclR (pfam09339), KOG3706 (KOG3706, Uncharacterized conserved protein ), RVT-UG22

Seq: FSQT01000002.1 (4852978 bp)
Overview 1 RT 1: 1938624-1946042 bp Neighborhood of RT #1 [1938624, 1946068] PcoD CopC RVT-GII GIIM mhpA LuxR_C_like Feature: gene Location: 1938624-1939550 bp Feature: domain Description: PcoD Location: 1938753-1939548 bp Feature: domain Description: PcoD Location: 1938753-1939548 bp Feature: gene Location: 1939550-1940146 bp Feature: domain Description: CopC Location: 1939634-1939913 bp Feature: domain Description: CopC Location: 1939634-1939913 bp Feature: gene Location: 1941297-1942754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1941630-1942326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1941630-1942 32 6 bp Feature: domain Description: GIIM Note: maturase Location: 1942395-1942620 bp Feature: domain Description: GIIM Note: maturase Location: 1942 395-1942 62 0 bp Feature: gene Location: 1943249-1944571 bp Feature: domain Description: mhpA Location: 1943252-1944506 bp Feature: domain Description: mhpA Location: 19432 52 -1944506 bp Feature: gene Location: 1945793-1946068 bp Feature: domain Description: LuxR_C_like Location: 1945955-1946042 bp Feature: domain Description: LuxR_C_like Location: 1945955-1946042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcoD (COG1276), CopC (pfam04234), RVT-GII, GIIM (pfam08388), mhpA (PRK06183), LuxR_C_like (cd06170)