myRT

myRT report for GCA_900144075.1_56

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Seq: FRGN01000145.1 (296220 bp)
Overview 1 RT 1: 49242-58121 bp 2 RT 2: 74386-84680 bp Neighborhood of RT #1 [49242, 58129] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74386, 84691] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49242-49916 bp Feature: domain Description: NTP_transferase_like_1 Location: 49248-49887 bp Feature: domain Description: NTP_transferase_like_1 Location: 49248-49887 bp Feature: gene Location: 49913-50929 bp Feature: domain Description: COG3178 Location: 49916-50915 bp Feature: domain Description: COG31 78 Location: 4991 6-5091 5 bp Feature: gene Location: 52201-53913 bp Feature: domain Description: RVT_N Location: 52258-52501 bp Feature: domain Description: RVT_N Location: 52258-52501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52546-53182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52546-531 82 bp Feature: domain Description: YkfC Location: 53389-53542 bp Feature: domain Description: YkfC Location: 53389-53542 bp Feature: domain Description: HNH Note: nucleases Location: 53719-53857 bp Feature: domain Description: HNH Note: nucleases Location: 5371 9-53857 bp Feature: gene Location: 54046-56856 bp Feature: domain Description: LptD Location: 54241-56842 bp Feature: domain Description: LptD Location: 54241 -56842 bp Feature: gene Location: 56915-58129 bp Feature: domain Description: PRK10770 Location: 56927-58121 bp Feature: domain Description: PRK1 0770 Location: 56927-581 21 bp Feature: gene Location: 74386-76239 bp Feature: domain Description: PRK05658 Location: 74398-76237 bp Feature: domain Description: PRK05658 Location: 74398-76237 bp Feature: gene Location: 76346-80083 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76454-77111 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76454-771 1 1 bp Feature: domain Description: PRK09776 Location: 77324-77795 bp Feature: domain Description: PRK09776 Location: 77324-77795 bp Feature: domain Description: PAS Location: 77840-78377 bp Feature: domain Description: PAS Location: 77840-78377 bp Feature: domain Description: PRK10060 Location: 78386-80033 bp Feature: domain Description: PRK1 0060 Location: 78386-80033 bp Feature: gene Location: 81164-82849 bp Feature: domain Description: RVT_N Location: 81221-81461 bp Feature: domain Description: RVT_N Location: 81 221 -81 461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81509-82145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 509-821 45 bp Feature: domain Description: GIIM Note: maturase Location: 82199-82430 bp Feature: domain Description: GIIM Note: maturase Location: 821 99-82430 bp Feature: domain Description: HNH Note: nucleases Location: 82682-82820 bp Feature: domain Description: HNH Note: nucleases Location: 82682-82820 bp Feature: gene Location: 83570-84691 bp Feature: domain Description: COG3177 Location: 83588-84680 bp Feature: domain Description: COG31 77 Location: 83588-84680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRGN01000110.1 (30244 bp)
Overview 1 RT 1: 6628-11007 bp Neighborhood of RT #1 [6628, 11007] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 6628-7455 bp Feature: domain Description: ABC_phnC Location: 6658-7372 bp Feature: domain Description: ABC_phnC Location: 6658-7372 bp Feature: gene Location: 7798-8439 bp Feature: domain Description: DUF772 Location: 7948-8143 bp Feature: domain Description: DUF772 Location: 7948-8143 bp Feature: gene Location: 8828-10096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9041-9698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9041-9698 bp Feature: domain Description: GIIM Note: maturase Location: 9776-9998 bp Feature: domain Description: GIIM Note: maturase Location: 9776-9998 bp Feature: gene Location: 10246-10644 bp Feature: gene Location: 10828-11007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRGN01000094.1 (2418 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963 -1614 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 213 3 -2289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT