myRT

myRT report for GCA_900144125.1_54

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Seq: FRGX01000118.1 (2418 bp)
Overview 1 RT 1: 83-2415 bp Neighborhood of RT #1 [83, 2415] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1801 bp Feature: domain Description: RVT_N Location: 140-377 bp Feature: domain Description: RVT_N Location: 1 40-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1 079 bp Feature: domain Description: GIIM Note: maturase Location: 1133-1364 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 33-1 364 bp Feature: domain Description: HNHc Note: nucleases Location: 1598-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1 598-1 754 bp Feature: gene Location: 2071-2199 bp Feature: gene Location: 2230-2415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRGX01000087.1 (30228 bp)
Overview 1 RT 1: 19230-23526 bp Neighborhood of RT #1 [19230, 23609] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 19230-19409 bp Feature: gene Location: 19593-19991 bp Feature: gene Location: 20141-21409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20354-21011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0354-2 1011 bp Feature: domain Description: GIIM Note: maturase Location: 21089-21311 bp Feature: domain Description: GIIM Note: maturase Location: 2 1089-2 1311 bp Feature: gene Location: 21798-22439 bp Feature: domain Description: DUF772 Location: 21948-22143 bp Feature: domain Description: DUF772 Location: 2 1948-2 2 143 bp Feature: gene Location: 22782-23609 bp Feature: domain Description: ABC_phnC Location: 22812-23526 bp Feature: domain Description: ABC_phnC Location: 2 2 812 -2 352 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRGX01000096.1 (66361 bp)
Overview 1 RT 1: 6917-15796 bp 2 RT 2: 32061-42355 bp Neighborhood of RT #1 [6917, 15804] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [32061, 42366] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 6917-7591 bp Feature: domain Description: NTP_transferase_like_1 Location: 6923-7562 bp Feature: domain Description: NTP_transferase_like_1 Location: 6923 -7562 bp Feature: gene Location: 7588-8604 bp Feature: domain Description: COG3178 Location: 7591-8590 bp Feature: domain Description: COG3 178 Location: 7591-8590 bp Feature: gene Location: 9876-11588 bp Feature: domain Description: RVT_N Location: 9933-10176 bp Feature: domain Description: RVT_N Location: 993 3 -10176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10221-10857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10221-10857 bp Feature: domain Description: YkfC Location: 11064-11217 bp Feature: domain Description: YkfC Location: 11064-11217 bp Feature: domain Description: HNH Note: nucleases Location: 11394-11532 bp Feature: domain Description: HNH Note: nucleases Location: 113 94-1153 2 bp Feature: gene Location: 11721-14531 bp Feature: domain Description: LptD Location: 11916-14517 bp Feature: domain Description: LptD Location: 11916-14517 bp Feature: gene Location: 14590-15804 bp Feature: domain Description: PRK10770 Location: 14602-15796 bp Feature: domain Description: PRK10770 Location: 14602-15796 bp Feature: gene Location: 32061-33914 bp Feature: domain Description: PRK05658 Location: 32073-33912 bp Feature: domain Description: PRK05658 Location: 3 2073 -3 3 912 bp Feature: gene Location: 34021-37758 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 34129-34786 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3 4129-3 4786 bp Feature: domain Description: PRK09776 Location: 34999-35470 bp Feature: domain Description: PRK09776 Location: 3 4999-3 5470 bp Feature: domain Description: PAS Location: 35515-36052 bp Feature: domain Description: PAS Location: 3 5515-3 6052 bp Feature: domain Description: PRK10060 Location: 36061-37708 bp Feature: domain Description: PRK10060 Location: 3 6061-3 7708 bp Feature: gene Location: 38839-40524 bp Feature: domain Description: RVT_N Location: 38896-39136 bp Feature: domain Description: RVT_N Location: 3 8896-3 913 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39184-39820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9184-3 9820 bp Feature: domain Description: GIIM Note: maturase Location: 39874-40105 bp Feature: domain Description: GIIM Note: maturase Location: 3 9874-40105 bp Feature: domain Description: HNH Note: nucleases Location: 40357-40495 bp Feature: domain Description: HNH Note: nucleases Location: 403 57-40495 bp Feature: gene Location: 41245-42366 bp Feature: domain Description: COG3177 Location: 41263-42355 bp Feature: domain Description: COG3 177 Location: 41263 -423 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT