myRT

myRT report for GCA_900144875.1_144

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Seq: FRKL01000314.1 (18711 bp)
Overview 1 RT 1: 1139-16984 bp Neighborhood of RT #1 [1139, 16986] HipA_So_like RVT-UG8 NERD zf-C4_Topoisom COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 1139-1456 bp Feature: domain Description: HipA_So_like Location: 1178-1418 bp Feature: domain Description: HipA_So_like Location: 1 1 78-1 41 8 bp Feature: gene Location: 1745-1993 bp Feature: gene Location: 2408-4378 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2939-3380 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2939-3380 bp Feature: gene Location: 5729-6505 bp Feature: domain Description: NERD Location: 5828-6161 bp Feature: domain Description: NERD Location: 5828-61 61 bp Feature: domain Description: zf-C4_Topoisom Location: 6380-6497 bp Feature: domain Description: zf-C4_Topoisom Location: 6380-6497 bp Feature: gene Location: 6676-7797 bp Feature: domain Description: COG3177 Location: 6694-7786 bp Feature: domain Description: COG31 77 Location: 6694-7786 bp Feature: gene Location: 8059-8220 bp Feature: gene Location: 8523-10208 bp Feature: domain Description: RVT_N Location: 8580-8820 bp Feature: domain Description: RVT_N Location: 8580-8820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8868-9504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8868-9504 bp Feature: domain Description: GIIM Note: maturase Location: 9558-9789 bp Feature: domain Description: GIIM Note: maturase Location: 9558-9789 bp Feature: domain Description: HNH Note: nucleases Location: 10041-10179 bp Feature: domain Description: HNH Note: nucleases Location: 1 0041 -1 01 79 bp Feature: gene Location: 11289-15026 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 11397-12054 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 1 397-1 2054 bp Feature: domain Description: PRK09776 Location: 12267-12738 bp Feature: domain Description: PRK09776 Location: 1 2267-1 2738 bp Feature: domain Description: PAS Location: 12810-13320 bp Feature: domain Description: PAS Location: 1 281 0-1 3320 bp Feature: domain Description: PRK10060 Location: 13329-14976 bp Feature: domain Description: PRK1 0060 Location: 1 3329-1 4976 bp Feature: gene Location: 15133-16986 bp Feature: domain Description: PRK05658 Location: 15145-16984 bp Feature: domain Description: PRK05658 Location: 1 51 45-1 6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipA_So_like (cd17809), RVT-UG8, NERD (pfam08378), zf-C4_Topoisom (pfam01396), COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)