myRT

myRT report for GCA_900145455.1_202

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Seq: FRLV01000120.1 (328384 bp)
Overview 1 RT 1: 49375-58233 bp 2 RT 2: 74497-84794 bp Neighborhood of RT #1 [49375, 58241] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74497, 84805] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49375-50049 bp Feature: domain Description: NTP_transferase_like_1 Location: 49381-50020 bp Feature: domain Description: NTP_transferase_like_1 Location: 49381 -50020 bp Feature: gene Location: 50046-51062 bp Feature: domain Description: COG3178 Location: 50049-51048 bp Feature: domain Description: COG31 78 Location: 50049-51 048 bp Feature: gene Location: 52334-54046 bp Feature: domain Description: RVT_N Location: 52391-52634 bp Feature: domain Description: RVT_N Location: 52391 -52634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52679-53312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52679-5331 2 bp Feature: domain Description: YkfC Location: 53525-53675 bp Feature: domain Description: YkfC Location: 53525-53675 bp Feature: domain Description: HNH Note: nucleases Location: 53852-53990 bp Feature: domain Description: HNH Note: nucleases Location: 53852-53990 bp Feature: gene Location: 54179-56968 bp Feature: domain Description: LptD Location: 54374-56954 bp Feature: domain Description: LptD Location: 54374-56954 bp Feature: gene Location: 57027-58241 bp Feature: domain Description: PRK10770 Location: 57039-58233 bp Feature: domain Description: PRK1 0770 Location: 57039-58233 bp Feature: gene Location: 74497-76350 bp Feature: domain Description: PRK05658 Location: 74509-76348 bp Feature: domain Description: PRK05658 Location: 74509-76348 bp Feature: gene Location: 76457-80194 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76565-77222 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76565-77222 bp Feature: domain Description: PRK09776 Location: 77435-77906 bp Feature: domain Description: PRK09776 Location: 77435-77906 bp Feature: domain Description: PAS Location: 77963-78488 bp Feature: domain Description: PAS Location: 77963-78488 bp Feature: domain Description: PRK10060 Location: 78497-80144 bp Feature: domain Description: PRK1 0060 Location: 78497-801 44 bp Feature: gene Location: 81275-82960 bp Feature: domain Description: RVT_N Location: 81332-81572 bp Feature: domain Description: RVT_N Location: 81 332-81 572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81620-82256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 620-82256 bp Feature: domain Description: GIIM Note: maturase Location: 82310-82541 bp Feature: domain Description: GIIM Note: maturase Location: 8231 0-82541 bp Feature: domain Description: HNH Note: nucleases Location: 82793-82931 bp Feature: domain Description: HNH Note: nucleases Location: 82793-82931 bp Feature: gene Location: 83288-83425 bp Feature: gene Location: 83684-84805 bp Feature: domain Description: COG3177 Location: 83702-84794 bp Feature: domain Description: COG31 77 Location: 83702-84794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: FRLV01000043.1 (102327 bp)
Overview 1 RT 1: 85400-92649 bp Neighborhood of RT #1 [85400, 92711] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 85400-85906 bp Feature: domain Description: HxlR Location: 85424-85742 bp Feature: domain Description: HxlR Location: 8542 4-85742 bp Feature: gene Location: 86015-87283 bp Feature: domain Description: PRK06333 Location: 86021-87278 bp Feature: domain Description: PRK06333 Location: 8602 1-872 78 bp Feature: gene Location: 87782-89128 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 88031-88817 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 88031-88817 bp Feature: gene Location: 89312-90148 bp Feature: domain Description: YHI9 Location: 89324-90140 bp Feature: domain Description: YHI9 Location: 8932 4-90140 bp Feature: gene Location: 90309-92711 bp Feature: domain Description: STN Location: 90429-90582 bp Feature: domain Description: STN Location: 9042 9-90582 bp Feature: domain Description: TonB-siderophor Location: 90690-92649 bp Feature: domain Description: TonB-siderophor Location: 90690-92 649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: FRLV01000110.1 (1858 bp)
Overview 1 RT 1: 65-1857 bp Neighborhood of RT #1 [65, 1857] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-93 5 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013 -123 5 bp Feature: gene Location: 1684-1857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)