myRT

myRT report for GCA_900146065.1_276

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Seq: FROE01000031.1 (82632 bp)
Overview 1 RT 1: 6942-15801 bp Neighborhood of RT #1 [6942, 15809] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 6942-7616 bp Feature: domain Description: NTP_transferase_like_1 Location: 6948-7587 bp Feature: domain Description: NTP_transferase_like_1 Location: 6948-7587 bp Feature: gene Location: 7613-8629 bp Feature: domain Description: COG3178 Location: 7616-8615 bp Feature: domain Description: COG31 78 Location: 761 6-861 5 bp Feature: gene Location: 9902-11614 bp Feature: domain Description: RVT_N Location: 9959-10202 bp Feature: domain Description: RVT_N Location: 9959-1 0202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10247-10883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0247-1 0883 bp Feature: domain Description: YkfC Location: 11093-11243 bp Feature: domain Description: YkfC Location: 1 1 093-1 1 243 bp Feature: domain Description: HNH Note: nucleases Location: 11420-11558 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 420-1 1 558 bp Feature: gene Location: 11747-14536 bp Feature: domain Description: LptD Location: 11942-14522 bp Feature: domain Description: LptD Location: 1 1 942-1 4522 bp Feature: gene Location: 14595-15809 bp Feature: domain Description: PRK10770 Location: 14607-15801 bp Feature: domain Description: PRK1 0770 Location: 1 4607-1 5801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FROE01000047.1 (51600 bp)
Overview 1 RT 1: 27151-30880 bp Neighborhood of RT #1 [27151, 30880] RVT-UG17 SLATT_5 Feature: gene Location: 27151-27576 bp Feature: gene Location: 27593-28063 bp Feature: gene Location: 28105-29469 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28333-28936 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 8333-2 8936 bp Feature: gene Location: 29466-30008 bp Feature: domain Description: SLATT_5 Location: 29472-29982 bp Feature: domain Description: SLATT_5 Location: 2 9472 -2 9982 bp Feature: gene Location: 30746-30880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FROE01000117.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-13 99 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)