myRT

myRT report for GCA_900146075.1_277

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Seq: FROF01000138.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1 399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1 477-1 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROF01000101.1 (51769 bp)
Overview 1 RT 1: 27155-30884 bp Neighborhood of RT #1 [27155, 30884] RVT-UG17 SLATT_5 Feature: gene Location: 27155-27580 bp Feature: gene Location: 27597-28067 bp Feature: gene Location: 28109-29473 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28337-28940 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 8337-2 8940 bp Feature: gene Location: 29470-30012 bp Feature: domain Description: SLATT_5 Location: 29476-29986 bp Feature: domain Description: SLATT_5 Location: 2 9476-2 9986 bp Feature: gene Location: 30750-30884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FROF01000085.1 (182623 bp)
Overview 1 RT 1: 124369-133207 bp Neighborhood of RT #1 [124369, 133236] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 124369-125583 bp Feature: domain Description: PRK10770 Location: 124381-125575 bp Feature: domain Description: PRK10770 Location: 1243 81-125575 bp Feature: gene Location: 125642-128431 bp Feature: domain Description: LptD Location: 125837-128417 bp Feature: domain Description: LptD Location: 12583 7-128417 bp Feature: gene Location: 128564-130276 bp Feature: domain Description: RVT_N Location: 128621-128864 bp Feature: domain Description: RVT_N Location: 128621-128864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128909-129545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128909-129545 bp Feature: domain Description: YkfC Location: 129755-129905 bp Feature: domain Description: YkfC Location: 129755-129905 bp Feature: domain Description: HNH Note: nucleases Location: 130082-130220 bp Feature: domain Description: HNH Note: nucleases Location: 13 0082-13 0220 bp Feature: gene Location: 131549-132565 bp Feature: domain Description: COG3178 Location: 131552-132551 bp Feature: domain Description: COG3 178 Location: 13 1552-13 2551 bp Feature: gene Location: 132562-133236 bp Feature: domain Description: NTP_transferase_like_1 Location: 132568-133207 bp Feature: domain Description: NTP_transferase_like_1 Location: 13 2568-13 3 207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)