myRT

myRT report for GCA_900146085.1_278

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Seq: FROG01000010.1 (55929 bp)
Overview 1 RT 1: 20883-24612 bp Neighborhood of RT #1 [20883, 24612] SLATT_5 RVT-UG17 Feature: gene Location: 20883-21017 bp Feature: gene Location: 21755-22297 bp Feature: domain Description: SLATT_5 Location: 21761-22271 bp Feature: domain Description: SLATT_5 Location: 21 761 -22271 bp Feature: gene Location: 22294-23658 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22522-23125 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 22522-231 25 bp Feature: gene Location: 23700-24170 bp Feature: gene Location: 24187-24612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FROG01000077.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013-12 35 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROG01000006.1 (321346 bp)
Overview 1 RT 1: 49386-58245 bp Neighborhood of RT #1 [49386, 58253] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49386-50060 bp Feature: domain Description: NTP_transferase_like_1 Location: 49392-50031 bp Feature: domain Description: NTP_transferase_like_1 Location: 493 92-5003 1 bp Feature: gene Location: 50057-51073 bp Feature: domain Description: COG3178 Location: 50060-51059 bp Feature: domain Description: COG3 178 Location: 50060-51059 bp Feature: gene Location: 52346-54058 bp Feature: domain Description: RVT_N Location: 52403-52646 bp Feature: domain Description: RVT_N Location: 52403 -52646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52691-53327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52691-53 3 27 bp Feature: domain Description: YkfC Location: 53537-53687 bp Feature: domain Description: YkfC Location: 53 53 7-53 687 bp Feature: domain Description: HNH Note: nucleases Location: 53864-54002 bp Feature: domain Description: HNH Note: nucleases Location: 53 864-54002 bp Feature: gene Location: 54191-56980 bp Feature: domain Description: LptD Location: 54386-56966 bp Feature: domain Description: LptD Location: 543 86-56966 bp Feature: gene Location: 57039-58253 bp Feature: domain Description: PRK10770 Location: 57051-58245 bp Feature: domain Description: PRK10770 Location: 57051-58245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)