myRT

myRT report for GCA_900146095.1_279

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Seq: FROH01000066.1 (46514 bp)
Overview 1 RT 1: 15826-19364 bp Neighborhood of RT #1 [15826, 19364] SLATT_5 RVT-UG17 Feature: gene Location: 15826-16146 bp Feature: gene Location: 16507-17049 bp Feature: domain Description: SLATT_5 Location: 16513-17023 bp Feature: domain Description: SLATT_5 Location: 1 651 3-1 7023 bp Feature: gene Location: 17046-18410 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17274-17877 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 7274-1 7877 bp Feature: gene Location: 18452-18922 bp Feature: gene Location: 18939-19364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FROH01000104.1 (321336 bp)
Overview 1 RT 1: 263086-271924 bp Neighborhood of RT #1 [263086, 271953] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 263086-264300 bp Feature: domain Description: PRK10770 Location: 263098-264292 bp Feature: domain Description: PRK10770 Location: 2 63098-2 642 92 bp Feature: gene Location: 264359-267148 bp Feature: domain Description: LptD Location: 264554-267134 bp Feature: domain Description: LptD Location: 2 64554-2 67134 bp Feature: gene Location: 267281-268993 bp Feature: domain Description: RVT_N Location: 267338-267581 bp Feature: domain Description: RVT_N Location: 2 67338-2 67581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267626-268262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6762 6-2 682 62 bp Feature: domain Description: YkfC Location: 268472-268622 bp Feature: domain Description: YkfC Location: 2 68472 -2 6862 2 bp Feature: domain Description: HNH Note: nucleases Location: 268799-268937 bp Feature: domain Description: HNH Note: nucleases Location: 2 68799-2 68937 bp Feature: gene Location: 270266-271282 bp Feature: domain Description: COG3178 Location: 270269-271268 bp Feature: domain Description: COG3178 Location: 2 702 69-2 712 68 bp Feature: gene Location: 271279-271953 bp Feature: domain Description: NTP_transferase_like_1 Location: 271285-271924 bp Feature: domain Description: NTP_transferase_like_1 Location: 2 712 85-2 7192 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FROH01000115.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-13 99 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)