myRT

myRT report for GCA_900146105.1_280

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Seq: FROJ01000015.1 (51667 bp)
Overview 1 RT 1: 27215-30944 bp Neighborhood of RT #1 [27215, 30944] RVT-UG17 SLATT_5 Feature: gene Location: 27215-27640 bp Feature: gene Location: 27657-28127 bp Feature: gene Location: 28169-29533 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28397-29000 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 28397-29000 bp Feature: gene Location: 29530-30072 bp Feature: domain Description: SLATT_5 Location: 29536-30046 bp Feature: domain Description: SLATT_5 Location: 29536-30046 bp Feature: gene Location: 30810-30944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FROJ01000091.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013-12 35 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROJ01000016.1 (325744 bp)
Overview 1 RT 1: 267486-276324 bp Neighborhood of RT #1 [267486, 276353] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 267486-268700 bp Feature: domain Description: PRK10770 Location: 267498-268692 bp Feature: domain Description: PRK10770 Location: 267498-268692 bp Feature: gene Location: 268759-271548 bp Feature: domain Description: LptD Location: 268954-271534 bp Feature: domain Description: LptD Location: 268954-27153 4 bp Feature: gene Location: 271681-273393 bp Feature: domain Description: RVT_N Location: 271738-271981 bp Feature: domain Description: RVT_N Location: 27173 8-271981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272026-272662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272026-272662 bp Feature: domain Description: YkfC Location: 272872-273022 bp Feature: domain Description: YkfC Location: 272872-273 022 bp Feature: domain Description: HNH Note: nucleases Location: 273199-273337 bp Feature: domain Description: HNH Note: nucleases Location: 273 199-273 3 3 7 bp Feature: gene Location: 274666-275682 bp Feature: domain Description: COG3178 Location: 274669-275668 bp Feature: domain Description: COG3 178 Location: 274669-275668 bp Feature: gene Location: 275679-276353 bp Feature: domain Description: NTP_transferase_like_1 Location: 275685-276324 bp Feature: domain Description: NTP_transferase_like_1 Location: 275685-2763 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)