myRT

myRT report for GCA_900146125.1_282

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Seq: FROK01000005.1 (325721 bp)
Overview 1 RT 1: 49386-58245 bp Neighborhood of RT #1 [49386, 58253] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49386-50060 bp Feature: domain Description: NTP_transferase_like_1 Location: 49392-50031 bp Feature: domain Description: NTP_transferase_like_1 Location: 49392-50031 bp Feature: gene Location: 50057-51073 bp Feature: domain Description: COG3178 Location: 50060-51059 bp Feature: domain Description: COG31 78 Location: 50060-51 059 bp Feature: gene Location: 52346-54058 bp Feature: domain Description: RVT_N Location: 52403-52646 bp Feature: domain Description: RVT_N Location: 52403-52646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52691-53327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52691 -53327 bp Feature: domain Description: YkfC Location: 53537-53687 bp Feature: domain Description: YkfC Location: 53537-53687 bp Feature: domain Description: HNH Note: nucleases Location: 53864-54002 bp Feature: domain Description: HNH Note: nucleases Location: 53864-54002 bp Feature: gene Location: 54191-56980 bp Feature: domain Description: LptD Location: 54386-56966 bp Feature: domain Description: LptD Location: 54386-56966 bp Feature: gene Location: 57039-58253 bp Feature: domain Description: PRK10770 Location: 57051-58245 bp Feature: domain Description: PRK1 0770 Location: 57051 -58245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FROK01000020.1 (46646 bp)
Overview 1 RT 1: 15833-19371 bp Neighborhood of RT #1 [15833, 19371] SLATT_5 RVT-UG17 Feature: gene Location: 15833-16153 bp Feature: gene Location: 16514-17056 bp Feature: domain Description: SLATT_5 Location: 16520-17030 bp Feature: domain Description: SLATT_5 Location: 1652 0-17030 bp Feature: gene Location: 17053-18417 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17281-17884 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 172 81-17884 bp Feature: gene Location: 18459-18929 bp Feature: gene Location: 18946-19371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FROK01000013.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-13 99 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)