myRT

myRT report for GCA_900146145.1_284

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Seq: FRON01000090.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1 399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1 477-1 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FRON01000024.1 (51760 bp)
Overview 1 RT 1: 20887-24616 bp Neighborhood of RT #1 [20887, 24616] SLATT_5 RVT-UG17 Feature: gene Location: 20887-21021 bp Feature: gene Location: 21759-22301 bp Feature: domain Description: SLATT_5 Location: 21765-22275 bp Feature: domain Description: SLATT_5 Location: 2 1765-2 2 2 75 bp Feature: gene Location: 22298-23662 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22526-23129 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 2 52 6-2 312 9 bp Feature: gene Location: 23704-24174 bp Feature: gene Location: 24191-24616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FRON01000087.1 (159285 bp)
Overview 1 RT 1: 101041-109879 bp Neighborhood of RT #1 [101041, 109908] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 101041-102255 bp Feature: domain Description: PRK10770 Location: 101053-102247 bp Feature: domain Description: PRK10770 Location: 101053 -102247 bp Feature: gene Location: 102314-105103 bp Feature: domain Description: LptD Location: 102509-105089 bp Feature: domain Description: LptD Location: 102509-105089 bp Feature: gene Location: 105236-106948 bp Feature: domain Description: RVT_N Location: 105293-105536 bp Feature: domain Description: RVT_N Location: 105293 -10553 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105581-106217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105581-106217 bp Feature: domain Description: YkfC Location: 106427-106577 bp Feature: domain Description: YkfC Location: 106427-106577 bp Feature: domain Description: HNH Note: nucleases Location: 106754-106892 bp Feature: domain Description: HNH Note: nucleases Location: 106754-106892 bp Feature: gene Location: 108221-109237 bp Feature: domain Description: COG3178 Location: 108224-109223 bp Feature: domain Description: COG3 178 Location: 108224-109223 bp Feature: gene Location: 109234-109908 bp Feature: domain Description: NTP_transferase_like_1 Location: 109240-109879 bp Feature: domain Description: NTP_transferase_like_1 Location: 109240-109879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)