myRT

myRT report for GCA_900146155.1_285

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Seq: FROM01000111.1 (321317 bp)
Overview 1 RT 1: 49382-58241 bp Neighborhood of RT #1 [49382, 58249] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49382-50056 bp Feature: domain Description: NTP_transferase_like_1 Location: 49388-50027 bp Feature: domain Description: NTP_transferase_like_1 Location: 49388-50027 bp Feature: gene Location: 50053-51069 bp Feature: domain Description: COG3178 Location: 50056-51055 bp Feature: domain Description: COG31 78 Location: 50056-51 055 bp Feature: gene Location: 52342-54054 bp Feature: domain Description: RVT_N Location: 52399-52642 bp Feature: domain Description: RVT_N Location: 52399-52642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52687-53323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52687-53323 bp Feature: domain Description: YkfC Location: 53533-53683 bp Feature: domain Description: YkfC Location: 53533-53683 bp Feature: domain Description: HNH Note: nucleases Location: 53860-53998 bp Feature: domain Description: HNH Note: nucleases Location: 53860-53998 bp Feature: gene Location: 54187-56976 bp Feature: domain Description: LptD Location: 54382-56962 bp Feature: domain Description: LptD Location: 54382-56962 bp Feature: gene Location: 57035-58249 bp Feature: domain Description: PRK10770 Location: 57047-58241 bp Feature: domain Description: PRK1 0770 Location: 57047-58241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FROM01000101.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -1399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROM01000035.1 (51764 bp)
Overview 1 RT 1: 20887-24616 bp Neighborhood of RT #1 [20887, 24616] SLATT_5 RVT-UG17 Feature: gene Location: 20887-21021 bp Feature: gene Location: 21759-22301 bp Feature: domain Description: SLATT_5 Location: 21765-22275 bp Feature: domain Description: SLATT_5 Location: 21765-22275 bp Feature: gene Location: 22298-23662 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22526-23129 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22526-23 129 bp Feature: gene Location: 23704-24174 bp Feature: gene Location: 24191-24616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17