myRT

myRT report for GCA_900146175.1_288

Download annotations/find similar RTs

Seq: FROQ01000116.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1 399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1 477-1 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROQ01000075.1 (125079 bp)
Overview 1 RT 1: 49376-58235 bp Neighborhood of RT #1 [49376, 58243] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49376-50050 bp Feature: domain Description: NTP_transferase_like_1 Location: 49382-50021 bp Feature: domain Description: NTP_transferase_like_1 Location: 49382 -5002 1 bp Feature: gene Location: 50047-51063 bp Feature: domain Description: COG3178 Location: 50050-51049 bp Feature: domain Description: COG3178 Location: 50050-51049 bp Feature: gene Location: 52336-54048 bp Feature: domain Description: RVT_N Location: 52393-52636 bp Feature: domain Description: RVT_N Location: 52 393-52 636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52681-53317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 681-53317 bp Feature: domain Description: YkfC Location: 53527-53677 bp Feature: domain Description: YkfC Location: 5352 7-53677 bp Feature: domain Description: HNH Note: nucleases Location: 53854-53992 bp Feature: domain Description: HNH Note: nucleases Location: 53854-53992 bp Feature: gene Location: 54181-56970 bp Feature: domain Description: LptD Location: 54376-56956 bp Feature: domain Description: LptD Location: 54376-56956 bp Feature: gene Location: 57029-58243 bp Feature: domain Description: PRK10770 Location: 57041-58235 bp Feature: domain Description: PRK10770 Location: 57041-582 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FROQ01000058.1 (46249 bp)
Overview 1 RT 1: 27143-30681 bp Neighborhood of RT #1 [27143, 30681] RVT-UG17 SLATT_5 Feature: gene Location: 27143-27568 bp Feature: gene Location: 27585-28055 bp Feature: gene Location: 28097-29461 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28325-28928 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 283 25-28928 bp Feature: gene Location: 29458-30000 bp Feature: domain Description: SLATT_5 Location: 29464-29974 bp Feature: domain Description: SLATT_5 Location: 29464-29974 bp Feature: gene Location: 30361-30681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)