myRT

myRT report for GCA_900146185.1_287

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Seq: FROO01000029.1 (50659 bp)
Overview 1 RT 1: 15816-19354 bp Neighborhood of RT #1 [15816, 19354] SLATT_5 RVT-UG17 Feature: gene Location: 15816-16136 bp Feature: gene Location: 16497-17039 bp Feature: domain Description: SLATT_5 Location: 16503-17013 bp Feature: domain Description: SLATT_5 Location: 1 6503-1 701 3 bp Feature: gene Location: 17036-18400 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17264-17867 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 7264-1 7867 bp Feature: gene Location: 18442-18912 bp Feature: gene Location: 18929-19354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FROO01000071.1 (316681 bp)
Overview 1 RT 1: 258435-267273 bp Neighborhood of RT #1 [258435, 267302] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 258435-259649 bp Feature: domain Description: PRK10770 Location: 258447-259641 bp Feature: domain Description: PRK10770 Location: 2 58447-2 59641 bp Feature: gene Location: 259708-262497 bp Feature: domain Description: LptD Location: 259903-262483 bp Feature: domain Description: LptD Location: 2 59903-2 62 483 bp Feature: gene Location: 262630-264342 bp Feature: domain Description: RVT_N Location: 262687-262930 bp Feature: domain Description: RVT_N Location: 2 62 687-2 62 930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262975-263611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 975-2 63611 bp Feature: domain Description: YkfC Location: 263821-263971 bp Feature: domain Description: YkfC Location: 2 6382 1-2 63971 bp Feature: domain Description: HNH Note: nucleases Location: 264148-264286 bp Feature: domain Description: HNH Note: nucleases Location: 2 64148-2 642 86 bp Feature: gene Location: 265615-266631 bp Feature: domain Description: COG3178 Location: 265618-266617 bp Feature: domain Description: COG3178 Location: 2 65618-2 66617 bp Feature: gene Location: 266628-267302 bp Feature: domain Description: NTP_transferase_like_1 Location: 266634-267273 bp Feature: domain Description: NTP_transferase_like_1 Location: 2 66634-2 672 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FROO01000075.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-93 5 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013 -123 5 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)