myRT

myRT report for GCA_900146215.1_292

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Seq: FROT01000075.1 (325739 bp)
Overview 1 RT 1: 49388-58247 bp Neighborhood of RT #1 [49388, 58255] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49388-50062 bp Feature: domain Description: NTP_transferase_like_1 Location: 49394-50033 bp Feature: domain Description: NTP_transferase_like_1 Location: 49394-50033 bp Feature: gene Location: 50059-51075 bp Feature: domain Description: COG3178 Location: 50062-51061 bp Feature: domain Description: COG31 78 Location: 50062-51 061 bp Feature: gene Location: 52348-54060 bp Feature: domain Description: RVT_N Location: 52405-52648 bp Feature: domain Description: RVT_N Location: 52405-52648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52693-53329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52693-53329 bp Feature: domain Description: YkfC Location: 53539-53689 bp Feature: domain Description: YkfC Location: 53539-53689 bp Feature: domain Description: HNH Note: nucleases Location: 53866-54004 bp Feature: domain Description: HNH Note: nucleases Location: 53866-54004 bp Feature: gene Location: 54193-56982 bp Feature: domain Description: LptD Location: 54388-56968 bp Feature: domain Description: LptD Location: 54388-56968 bp Feature: gene Location: 57041-58255 bp Feature: domain Description: PRK10770 Location: 57053-58247 bp Feature: domain Description: PRK1 0770 Location: 57053-58247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FROT01000030.1 (46524 bp)
Overview 1 RT 1: 15832-19370 bp Neighborhood of RT #1 [15832, 19370] SLATT_5 RVT-UG17 Feature: gene Location: 15832-16152 bp Feature: gene Location: 16513-17055 bp Feature: domain Description: SLATT_5 Location: 16519-17029 bp Feature: domain Description: SLATT_5 Location: 16519-1702 9 bp Feature: gene Location: 17052-18416 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17280-17883 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 172 80-17883 bp Feature: gene Location: 18458-18928 bp Feature: gene Location: 18945-19370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FROT01000059.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-93 5 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013 -123 5 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)