myRT

myRT report for GCA_900146225.1_291

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Seq: FROS01000102.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1 399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1 477-1 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FROS01000015.1 (99845 bp)
Overview 1 RT 1: 41597-50435 bp Neighborhood of RT #1 [41597, 50464] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 41597-42811 bp Feature: domain Description: PRK10770 Location: 41609-42803 bp Feature: domain Description: PRK10770 Location: 41609-42 803 bp Feature: gene Location: 42870-45659 bp Feature: domain Description: LptD Location: 43065-45645 bp Feature: domain Description: LptD Location: 43065-45645 bp Feature: gene Location: 45792-47504 bp Feature: domain Description: RVT_N Location: 45849-46092 bp Feature: domain Description: RVT_N Location: 45849-46092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46137-46773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46137-46773 bp Feature: domain Description: YkfC Location: 46983-47133 bp Feature: domain Description: YkfC Location: 46983-47133 bp Feature: domain Description: HNH Note: nucleases Location: 47310-47448 bp Feature: domain Description: HNH Note: nucleases Location: 47310-47448 bp Feature: gene Location: 48777-49793 bp Feature: domain Description: COG3178 Location: 48780-49779 bp Feature: domain Description: COG3178 Location: 48780-49779 bp Feature: gene Location: 49790-50464 bp Feature: domain Description: NTP_transferase_like_1 Location: 49796-50435 bp Feature: domain Description: NTP_transferase_like_1 Location: 49796-50435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FROS01000062.1 (46511 bp)
Overview 1 RT 1: 27149-30687 bp Neighborhood of RT #1 [27149, 30687] RVT-UG17 SLATT_5 Feature: gene Location: 27149-27574 bp Feature: gene Location: 27591-28061 bp Feature: gene Location: 28103-29467 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28331-28934 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 283 3 1-2893 4 bp Feature: gene Location: 29464-30006 bp Feature: domain Description: SLATT_5 Location: 29470-29980 bp Feature: domain Description: SLATT_5 Location: 29470-29980 bp Feature: gene Location: 30367-30687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)