myRT

myRT report for GCA_900146555.1_326

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Seq: FRQB01000071.1 (443966 bp)
Overview 1 RT 1: 49722-58581 bp Neighborhood of RT #1 [49722, 58589] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49722-50396 bp Feature: domain Description: NTP_transferase_like_1 Location: 49728-50367 bp Feature: domain Description: NTP_transferase_like_1 Location: 49728-50367 bp Feature: gene Location: 50393-51409 bp Feature: domain Description: COG3178 Location: 50396-51395 bp Feature: domain Description: COG31 78 Location: 50396-51 395 bp Feature: gene Location: 52682-54394 bp Feature: domain Description: RVT_N Location: 52739-52982 bp Feature: domain Description: RVT_N Location: 52739-52982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53027-53663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53027-53663 bp Feature: domain Description: YkfC Location: 53873-54023 bp Feature: domain Description: YkfC Location: 53873-54023 bp Feature: domain Description: HNH Note: nucleases Location: 54200-54338 bp Feature: domain Description: HNH Note: nucleases Location: 54200-54338 bp Feature: gene Location: 54527-57316 bp Feature: domain Description: LptD Location: 54722-57302 bp Feature: domain Description: LptD Location: 54722-57302 bp Feature: gene Location: 57375-58589 bp Feature: domain Description: PRK10770 Location: 57387-58581 bp Feature: domain Description: PRK1 0770 Location: 57387-58581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FRQB01000018.1 (51831 bp)
Overview 1 RT 1: 27217-30946 bp Neighborhood of RT #1 [27217, 30946] RVT-UG17 SLATT_5 Feature: gene Location: 27217-27642 bp Feature: gene Location: 27659-28129 bp Feature: gene Location: 28171-29535 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28399-29002 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 8399-2 9002 bp Feature: gene Location: 29532-30074 bp Feature: domain Description: SLATT_5 Location: 29538-30048 bp Feature: domain Description: SLATT_5 Location: 2 9538-30048 bp Feature: gene Location: 30812-30946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FRQB01000064.1 (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-93 5 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013 -123 5 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)