myRT

myRT report for GCA_900146565.1_327

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Seq: FRQC01000089.1 (326067 bp)
Overview 1 RT 1: 49720-58579 bp Neighborhood of RT #1 [49720, 58587] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49720-50394 bp Feature: domain Description: NTP_transferase_like_1 Location: 49726-50365 bp Feature: domain Description: NTP_transferase_like_1 Location: 49726-50365 bp Feature: gene Location: 50391-51407 bp Feature: domain Description: COG3178 Location: 50394-51393 bp Feature: domain Description: COG31 78 Location: 50394-51 393 bp Feature: gene Location: 52680-54392 bp Feature: domain Description: RVT_N Location: 52737-52980 bp Feature: domain Description: RVT_N Location: 52737-52980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53025-53661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53025-53661 bp Feature: domain Description: YkfC Location: 53871-54021 bp Feature: domain Description: YkfC Location: 53871 -54021 bp Feature: domain Description: HNH Note: nucleases Location: 54198-54336 bp Feature: domain Description: HNH Note: nucleases Location: 541 98-54336 bp Feature: gene Location: 54525-57314 bp Feature: domain Description: LptD Location: 54720-57300 bp Feature: domain Description: LptD Location: 54720-57300 bp Feature: gene Location: 57373-58587 bp Feature: domain Description: PRK10770 Location: 57385-58579 bp Feature: domain Description: PRK1 0770 Location: 57385-58579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FRQC01000066.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -1399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FRQC01000018.1 (51816 bp)
Overview 1 RT 1: 20873-24602 bp Neighborhood of RT #1 [20873, 24602] SLATT_5 RVT-UG17 Feature: gene Location: 20873-21007 bp Feature: gene Location: 21745-22287 bp Feature: domain Description: SLATT_5 Location: 21751-22261 bp Feature: domain Description: SLATT_5 Location: 21751-22261 bp Feature: gene Location: 22284-23648 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22512-23115 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22512-23 115 bp Feature: gene Location: 23690-24160 bp Feature: gene Location: 24177-24602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17