myRT

myRT report for GCA_900146605.1_329

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Seq: FRQE01000003.1 (325734 bp)
Overview 1 RT 1: 49390-58249 bp Neighborhood of RT #1 [49390, 58257] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49390-50064 bp Feature: domain Description: NTP_transferase_like_1 Location: 49396-50035 bp Feature: domain Description: NTP_transferase_like_1 Location: 49396-50035 bp Feature: gene Location: 50061-51077 bp Feature: domain Description: COG3178 Location: 50064-51063 bp Feature: domain Description: COG31 78 Location: 50064-51 063 bp Feature: gene Location: 52350-54062 bp Feature: domain Description: RVT_N Location: 52407-52650 bp Feature: domain Description: RVT_N Location: 52407-52650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52695-53331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52695-53331 bp Feature: domain Description: YkfC Location: 53541-53691 bp Feature: domain Description: YkfC Location: 53541 -53691 bp Feature: domain Description: HNH Note: nucleases Location: 53868-54006 bp Feature: domain Description: HNH Note: nucleases Location: 53868-54006 bp Feature: gene Location: 54195-56984 bp Feature: domain Description: LptD Location: 54390-56970 bp Feature: domain Description: LptD Location: 54390-56970 bp Feature: gene Location: 57043-58257 bp Feature: domain Description: PRK10770 Location: 57055-58249 bp Feature: domain Description: PRK1 0770 Location: 57055-58249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FRQE01000061.1 (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -1399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FRQE01000042.1 (51778 bp)
Overview 1 RT 1: 27157-30886 bp Neighborhood of RT #1 [27157, 30886] RVT-UG17 SLATT_5 Feature: gene Location: 27157-27582 bp Feature: gene Location: 27599-28069 bp Feature: gene Location: 28111-29475 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28339-28942 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 283 3 9-28942 bp Feature: gene Location: 29472-30014 bp Feature: domain Description: SLATT_5 Location: 29478-29988 bp Feature: domain Description: SLATT_5 Location: 29478-29988 bp Feature: gene Location: 30752-30886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)