myRT

myRT report for GCA_900147255.1_400

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Seq: FRSU01000305.1 (22332 bp)
Overview 1 RT 1: 12532-16652 bp Neighborhood of RT #1 [12532, 16652] SLATT_5 RVT-UG17 Feature: gene Location: 12532-13434 bp Feature: gene Location: 13795-14337 bp Feature: domain Description: SLATT_5 Location: 13801-14311 bp Feature: domain Description: SLATT_5 Location: 1 3801 -1 431 1 bp Feature: gene Location: 14334-15698 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14562-15165 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4562-1 51 65 bp Feature: gene Location: 15740-16210 bp Feature: gene Location: 16227-16652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FRSU01000070.1 (79772 bp)
Overview 1 RT 1: 21343-30180 bp Neighborhood of RT #1 [21343, 30209] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 21343-22557 bp Feature: domain Description: PRK10770 Location: 21355-22549 bp Feature: domain Description: PRK10770 Location: 2 1355-2 2 549 bp Feature: gene Location: 22616-25405 bp Feature: domain Description: LptD Location: 22811-25391 bp Feature: domain Description: LptD Location: 2 2 811-2 5391 bp Feature: gene Location: 25538-27250 bp Feature: domain Description: RVT_N Location: 25595-25838 bp Feature: domain Description: RVT_N Location: 2 5595-2 5838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25883-26516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5883-2 6516 bp Feature: domain Description: YkfC Location: 26729-26879 bp Feature: domain Description: YkfC Location: 2 672 9-2 6879 bp Feature: domain Description: HNH Note: nucleases Location: 27056-27194 bp Feature: domain Description: HNH Note: nucleases Location: 2 7056-2 7194 bp Feature: gene Location: 28522-29538 bp Feature: domain Description: COG3178 Location: 28525-29524 bp Feature: domain Description: COG3178 Location: 2 852 5-2 952 4 bp Feature: gene Location: 29535-30209 bp Feature: domain Description: NTP_transferase_like_1 Location: 29541-30180 bp Feature: domain Description: NTP_transferase_like_1 Location: 2 9541-30180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FRSU01000429.1 (19782 bp)
Overview 1 RT 1: 10564-14860 bp Neighborhood of RT #1 [10564, 14943] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 10564-10743 bp Feature: gene Location: 10927-11325 bp Feature: gene Location: 11475-12743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11688-12345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11688-123 45 bp Feature: domain Description: GIIM Note: maturase Location: 12423-12645 bp Feature: domain Description: GIIM Note: maturase Location: 12423 -12645 bp Feature: gene Location: 13132-13773 bp Feature: domain Description: DUF772 Location: 13282-13477 bp Feature: domain Description: DUF772 Location: 13 282-13 477 bp Feature: gene Location: 14116-14943 bp Feature: domain Description: ABC_phnC Location: 14146-14860 bp Feature: domain Description: ABC_phnC Location: 14146-14860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)