myRT

myRT report for GCA_900147265.1_399

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Seq: FRST01000278.1 (20159 bp)
Overview 1 RT 1: 10943-15239 bp Neighborhood of RT #1 [10943, 15322] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 10943-11122 bp Feature: gene Location: 11306-11704 bp Feature: gene Location: 11854-13122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12067-12724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2067-1 2724 bp Feature: domain Description: GIIM Note: maturase Location: 12802-13024 bp Feature: domain Description: GIIM Note: maturase Location: 1 2802-1 3024 bp Feature: gene Location: 13511-14152 bp Feature: domain Description: DUF772 Location: 13661-13856 bp Feature: domain Description: DUF772 Location: 1 3661 -1 3856 bp Feature: gene Location: 14495-15322 bp Feature: domain Description: ABC_phnC Location: 14525-15239 bp Feature: domain Description: ABC_phnC Location: 1 4525-1 5239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: FRST01000128.1 (23051 bp)
Overview 1 RT 1: 5678-9798 bp Neighborhood of RT #1 [5678, 9798] RVT-UG17 SLATT_5 Feature: gene Location: 5678-6103 bp Feature: gene Location: 6120-6590 bp Feature: gene Location: 6632-7996 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6860-7463 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6860-7463 bp Feature: gene Location: 7993-8535 bp Feature: domain Description: SLATT_5 Location: 7999-8509 bp Feature: domain Description: SLATT_5 Location: 7999-8509 bp Feature: gene Location: 8896-9798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FRST01000169.1 (125299 bp)
Overview 1 RT 1: 49563-58421 bp Neighborhood of RT #1 [49563, 58429] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49563-50237 bp Feature: domain Description: NTP_transferase_like_1 Location: 49569-50208 bp Feature: domain Description: NTP_transferase_like_1 Location: 49569-50208 bp Feature: gene Location: 50234-51250 bp Feature: domain Description: COG3178 Location: 50237-51236 bp Feature: domain Description: COG3 178 Location: 5023 7-5123 6 bp Feature: gene Location: 52522-54234 bp Feature: domain Description: RVT_N Location: 52579-52822 bp Feature: domain Description: RVT_N Location: 52579-52822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52867-53500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52867-53 500 bp Feature: domain Description: YkfC Location: 53713-53863 bp Feature: domain Description: YkfC Location: 53 713 -53 863 bp Feature: domain Description: HNH Note: nucleases Location: 54040-54178 bp Feature: domain Description: HNH Note: nucleases Location: 54040-54178 bp Feature: gene Location: 54367-57156 bp Feature: domain Description: LptD Location: 54562-57142 bp Feature: domain Description: LptD Location: 54562-57142 bp Feature: gene Location: 57215-58429 bp Feature: domain Description: PRK10770 Location: 57227-58421 bp Feature: domain Description: PRK10770 Location: 57227-58421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)