myRT

myRT report for GCA_900147275.1_401

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Seq: FRSV01000176.1 (125221 bp)
Overview 1 RT 1: 66807-75644 bp Neighborhood of RT #1 [66807, 75673] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 66807-68021 bp Feature: domain Description: PRK10770 Location: 66819-68013 bp Feature: domain Description: PRK1 0770 Location: 6681 9-6801 3 bp Feature: gene Location: 68080-70869 bp Feature: domain Description: LptD Location: 68275-70855 bp Feature: domain Description: LptD Location: 68275-70855 bp Feature: gene Location: 71002-72714 bp Feature: domain Description: RVT_N Location: 71059-71302 bp Feature: domain Description: RVT_N Location: 71 059-71 302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71347-71980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 347-71 980 bp Feature: domain Description: YkfC Location: 72193-72343 bp Feature: domain Description: YkfC Location: 721 93-72343 bp Feature: domain Description: HNH Note: nucleases Location: 72520-72658 bp Feature: domain Description: HNH Note: nucleases Location: 72520-72658 bp Feature: gene Location: 73986-75002 bp Feature: domain Description: COG3178 Location: 73989-74988 bp Feature: domain Description: COG31 78 Location: 73989-74988 bp Feature: gene Location: 74999-75673 bp Feature: domain Description: NTP_transferase_like_1 Location: 75005-75644 bp Feature: domain Description: NTP_transferase_like_1 Location: 75005-75644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FRSV01000486.1 (19747 bp)
Overview 1 RT 1: 4824-9203 bp Neighborhood of RT #1 [4824, 9203] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4824-5651 bp Feature: domain Description: ABC_phnC Location: 4854-5568 bp Feature: domain Description: ABC_phnC Location: 4854-5568 bp Feature: gene Location: 5994-6635 bp Feature: domain Description: DUF772 Location: 6144-6339 bp Feature: domain Description: DUF772 Location: 6144-6339 bp Feature: gene Location: 7024-8292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7237-7894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 37-7894 bp Feature: domain Description: GIIM Note: maturase Location: 7972-8194 bp Feature: domain Description: GIIM Note: maturase Location: 7972 -8194 bp Feature: gene Location: 8442-8840 bp Feature: gene Location: 9024-9203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: FRSV01000408.1 (22317 bp)
Overview 1 RT 1: 12533-16653 bp Neighborhood of RT #1 [12533, 16653] SLATT_5 RVT-UG17 Feature: gene Location: 12533-13435 bp Feature: gene Location: 13796-14338 bp Feature: domain Description: SLATT_5 Location: 13802-14312 bp Feature: domain Description: SLATT_5 Location: 13 802-143 12 bp Feature: gene Location: 14335-15699 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14563-15166 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14563 -15166 bp Feature: gene Location: 15741-16211 bp Feature: gene Location: 16228-16653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17