myRT

myRT report for GCA_900147285.1_402

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Seq: FRSW01000376.1 (22363 bp)
Overview 1 RT 1: 12564-16684 bp Neighborhood of RT #1 [12564, 16684] SLATT_5 RVT-UG17 Feature: gene Location: 12564-13466 bp Feature: gene Location: 13827-14369 bp Feature: domain Description: SLATT_5 Location: 13833-14343 bp Feature: domain Description: SLATT_5 Location: 1 3833-1 4343 bp Feature: gene Location: 14366-15730 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14594-15197 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4594-1 51 97 bp Feature: gene Location: 15772-16242 bp Feature: gene Location: 16259-16684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FRSW01000438.1 (14299 bp)
Overview 1 RT 1: 4840-9219 bp Neighborhood of RT #1 [4840, 9219] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4840-5667 bp Feature: domain Description: ABC_phnC Location: 4870-5584 bp Feature: domain Description: ABC_phnC Location: 4870-5584 bp Feature: gene Location: 6010-6651 bp Feature: domain Description: DUF772 Location: 6160-6355 bp Feature: domain Description: DUF772 Location: 6160-6355 bp Feature: gene Location: 7040-8308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7253-7910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 53-7910 bp Feature: domain Description: GIIM Note: maturase Location: 7988-8210 bp Feature: domain Description: GIIM Note: maturase Location: 7988-82 10 bp Feature: gene Location: 8458-8856 bp Feature: gene Location: 9040-9219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: FRSW01000032.1 (125274 bp)
Overview 1 RT 1: 49566-58424 bp Neighborhood of RT #1 [49566, 58432] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49566-50240 bp Feature: domain Description: NTP_transferase_like_1 Location: 49572-50211 bp Feature: domain Description: NTP_transferase_like_1 Location: 49572-50211 bp Feature: gene Location: 50237-51253 bp Feature: domain Description: COG3178 Location: 50240-51239 bp Feature: domain Description: COG3 178 Location: 50240-5123 9 bp Feature: gene Location: 52525-54237 bp Feature: domain Description: RVT_N Location: 52582-52825 bp Feature: domain Description: RVT_N Location: 52582-52825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52870-53503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52870-53 503 bp Feature: domain Description: YkfC Location: 53716-53866 bp Feature: domain Description: YkfC Location: 53 716-53 866 bp Feature: domain Description: HNH Note: nucleases Location: 54043-54181 bp Feature: domain Description: HNH Note: nucleases Location: 54043 -54181 bp Feature: gene Location: 54370-57159 bp Feature: domain Description: LptD Location: 54565-57145 bp Feature: domain Description: LptD Location: 54565-57145 bp Feature: gene Location: 57218-58432 bp Feature: domain Description: PRK10770 Location: 57230-58424 bp Feature: domain Description: PRK10770 Location: 5723 0-58424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)