myRT

myRT report for GCA_900147295.1_403

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Seq: FRSX01000130.1 (22350 bp)
Overview 1 RT 1: 12564-16684 bp Neighborhood of RT #1 [12564, 16684] SLATT_5 RVT-UG17 Feature: gene Location: 12564-13466 bp Feature: gene Location: 13827-14369 bp Feature: domain Description: SLATT_5 Location: 13833-14343 bp Feature: domain Description: SLATT_5 Location: 1 3833-1 4343 bp Feature: gene Location: 14366-15730 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14594-15197 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4594-1 51 97 bp Feature: gene Location: 15772-16242 bp Feature: gene Location: 16259-16684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FRSX01000062.1 (125264 bp)
Overview 1 RT 1: 49551-58409 bp Neighborhood of RT #1 [49551, 58417] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49551-50225 bp Feature: domain Description: NTP_transferase_like_1 Location: 49557-50196 bp Feature: domain Description: NTP_transferase_like_1 Location: 49557-50196 bp Feature: gene Location: 50222-51238 bp Feature: domain Description: COG3178 Location: 50225-51224 bp Feature: domain Description: COG3178 Location: 502 2 5-512 2 4 bp Feature: gene Location: 52510-54222 bp Feature: domain Description: RVT_N Location: 52567-52810 bp Feature: domain Description: RVT_N Location: 52 567-52 810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52855-53488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 855-53488 bp Feature: domain Description: YkfC Location: 53701-53851 bp Feature: domain Description: YkfC Location: 53701-53851 bp Feature: domain Description: HNH Note: nucleases Location: 54028-54166 bp Feature: domain Description: HNH Note: nucleases Location: 5402 8-54166 bp Feature: gene Location: 54355-57144 bp Feature: domain Description: LptD Location: 54550-57130 bp Feature: domain Description: LptD Location: 54550-57130 bp Feature: gene Location: 57203-58417 bp Feature: domain Description: PRK10770 Location: 57215-58409 bp Feature: domain Description: PRK10770 Location: 572 15-58409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: FRSX01000351.1 (9413 bp)
Overview 1 RT 1: 4827-9206 bp Neighborhood of RT #1 [4827, 9206] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4827-5654 bp Feature: domain Description: ABC_phnC Location: 4857-5571 bp Feature: domain Description: ABC_phnC Location: 4857-5571 bp Feature: gene Location: 5997-6638 bp Feature: domain Description: DUF772 Location: 6147-6342 bp Feature: domain Description: DUF772 Location: 6147-63 42 bp Feature: gene Location: 7027-8295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7897 bp Feature: domain Description: GIIM Note: maturase Location: 7975-8197 bp Feature: domain Description: GIIM Note: maturase Location: 7975-8197 bp Feature: gene Location: 8445-8843 bp Feature: gene Location: 9027-9206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)