myRT

myRT report for GCA_900147335.1_408

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Seq: FRTB01000305.1 (20160 bp)
Overview 1 RT 1: 10948-15244 bp Neighborhood of RT #1 [10948, 15327] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 10948-11127 bp Feature: gene Location: 11311-11709 bp Feature: gene Location: 11859-13127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12072-12729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2072-1 2729 bp Feature: domain Description: GIIM Note: maturase Location: 12807-13029 bp Feature: domain Description: GIIM Note: maturase Location: 1 2807-1 3029 bp Feature: gene Location: 13516-14157 bp Feature: domain Description: DUF772 Location: 13666-13861 bp Feature: domain Description: DUF772 Location: 1 3666-1 3861 bp Feature: gene Location: 14500-15327 bp Feature: domain Description: ABC_phnC Location: 14530-15244 bp Feature: domain Description: ABC_phnC Location: 1 4530-1 5244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: FRTB01000112.1 (23060 bp)
Overview 1 RT 1: 5675-9795 bp Neighborhood of RT #1 [5675, 9795] RVT-UG17 SLATT_5 Feature: gene Location: 5675-6100 bp Feature: gene Location: 6117-6587 bp Feature: gene Location: 6629-7993 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6857-7460 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6857-7460 bp Feature: gene Location: 7990-8532 bp Feature: domain Description: SLATT_5 Location: 7996-8506 bp Feature: domain Description: SLATT_5 Location: 7996-8506 bp Feature: gene Location: 8893-9795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FRTB01000181.1 (125301 bp)
Overview 1 RT 1: 49558-58416 bp Neighborhood of RT #1 [49558, 58424] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49558-50232 bp Feature: domain Description: NTP_transferase_like_1 Location: 49564-50203 bp Feature: domain Description: NTP_transferase_like_1 Location: 49564-50203 bp Feature: gene Location: 50229-51245 bp Feature: domain Description: COG3178 Location: 50232-51231 bp Feature: domain Description: COG3 178 Location: 5023 2-5123 1 bp Feature: gene Location: 52517-54229 bp Feature: domain Description: RVT_N Location: 52574-52817 bp Feature: domain Description: RVT_N Location: 52574-52817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52862-53495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52862-53 495 bp Feature: domain Description: YkfC Location: 53708-53858 bp Feature: domain Description: YkfC Location: 53 708-53 858 bp Feature: domain Description: HNH Note: nucleases Location: 54035-54173 bp Feature: domain Description: HNH Note: nucleases Location: 5403 5-54173 bp Feature: gene Location: 54362-57151 bp Feature: domain Description: LptD Location: 54557-57137 bp Feature: domain Description: LptD Location: 54557-5713 7 bp Feature: gene Location: 57210-58424 bp Feature: domain Description: PRK10770 Location: 57222-58416 bp Feature: domain Description: PRK10770 Location: 57222-58416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)