myRT

myRT report for GCA_900147345.1_407

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Seq: FRTC01000320.1 (10014 bp)
Overview 1 RT 1: 4836-9215 bp Neighborhood of RT #1 [4836, 9215] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4836-5663 bp Feature: domain Description: ABC_phnC Location: 4866-5580 bp Feature: domain Description: ABC_phnC Location: 4866-5580 bp Feature: gene Location: 6006-6647 bp Feature: domain Description: DUF772 Location: 6156-6351 bp Feature: domain Description: DUF772 Location: 61 56-6351 bp Feature: gene Location: 7036-8304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7249-7906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7249-7906 bp Feature: domain Description: GIIM Note: maturase Location: 7984-8206 bp Feature: domain Description: GIIM Note: maturase Location: 7984-8206 bp Feature: gene Location: 8454-8852 bp Feature: gene Location: 9036-9215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: FRTC01000055.1 (23056 bp)
Overview 1 RT 1: 5677-9797 bp Neighborhood of RT #1 [5677, 9797] RVT-UG17 SLATT_5 Feature: gene Location: 5677-6102 bp Feature: gene Location: 6119-6589 bp Feature: gene Location: 6631-7995 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6859-7462 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6859-7462 bp Feature: gene Location: 7992-8534 bp Feature: domain Description: SLATT_5 Location: 7998-8508 bp Feature: domain Description: SLATT_5 Location: 7998-8508 bp Feature: gene Location: 8895-9797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FRTC01000059.1 (125277 bp)
Overview 1 RT 1: 49561-58419 bp Neighborhood of RT #1 [49561, 58427] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49561-50235 bp Feature: domain Description: NTP_transferase_like_1 Location: 49567-50206 bp Feature: domain Description: NTP_transferase_like_1 Location: 49567-50206 bp Feature: gene Location: 50232-51248 bp Feature: domain Description: COG3178 Location: 50235-51234 bp Feature: domain Description: COG3 178 Location: 5023 5-5123 4 bp Feature: gene Location: 52520-54232 bp Feature: domain Description: RVT_N Location: 52577-52820 bp Feature: domain Description: RVT_N Location: 52577-52820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52865-53498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52865-53 498 bp Feature: domain Description: YkfC Location: 53711-53861 bp Feature: domain Description: YkfC Location: 53 711-53 861 bp Feature: domain Description: HNH Note: nucleases Location: 54038-54176 bp Feature: domain Description: HNH Note: nucleases Location: 5403 8-54176 bp Feature: gene Location: 54365-57154 bp Feature: domain Description: LptD Location: 54560-57140 bp Feature: domain Description: LptD Location: 54560-57140 bp Feature: gene Location: 57213-58427 bp Feature: domain Description: PRK10770 Location: 57225-58419 bp Feature: domain Description: PRK10770 Location: 57225-58419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)