myRT

myRT report for GCA_900147355.1_410

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Seq: FRTD01000234.1 (20136 bp)
Overview 1 RT 1: 4816-9195 bp Neighborhood of RT #1 [4816, 9195] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4816-5643 bp Feature: domain Description: ABC_phnC Location: 4846-5560 bp Feature: domain Description: ABC_phnC Location: 4846-5560 bp Feature: gene Location: 5986-6627 bp Feature: domain Description: DUF772 Location: 6136-6331 bp Feature: domain Description: DUF772 Location: 61 36-6331 bp Feature: gene Location: 7016-8284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7229-7886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7229-7886 bp Feature: domain Description: GIIM Note: maturase Location: 7964-8186 bp Feature: domain Description: GIIM Note: maturase Location: 7964-81 86 bp Feature: gene Location: 8434-8832 bp Feature: gene Location: 9016-9195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: FRTD01000016.1 (18873 bp)
Overview 1 RT 1: 15513-18871 bp Neighborhood of RT #1 [15513, 18871] SLATT_5 RVT-UG17 Feature: gene Location: 15513-15833 bp Feature: gene Location: 16194-16736 bp Feature: domain Description: SLATT_5 Location: 16200-16710 bp Feature: domain Description: SLATT_5 Location: 162 00-16710 bp Feature: gene Location: 16733-18097 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16961-17564 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16961-17564 bp Feature: gene Location: 18139-18609 bp Feature: gene Location: 18626-18871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FRTD01000022.1 (125252 bp)
Overview 1 RT 1: 49540-58398 bp Neighborhood of RT #1 [49540, 58406] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49540-50214 bp Feature: domain Description: NTP_transferase_like_1 Location: 49546-50185 bp Feature: domain Description: NTP_transferase_like_1 Location: 49546-50185 bp Feature: gene Location: 50211-51227 bp Feature: domain Description: COG3178 Location: 50214-51213 bp Feature: domain Description: COG3 178 Location: 50214-51213 bp Feature: gene Location: 52499-54211 bp Feature: domain Description: RVT_N Location: 52556-52799 bp Feature: domain Description: RVT_N Location: 52556-52799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52844-53477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52844-53 477 bp Feature: domain Description: YkfC Location: 53690-53840 bp Feature: domain Description: YkfC Location: 53 690-53 840 bp Feature: domain Description: HNH Note: nucleases Location: 54017-54155 bp Feature: domain Description: HNH Note: nucleases Location: 54017-54155 bp Feature: gene Location: 54344-57133 bp Feature: domain Description: LptD Location: 54539-57119 bp Feature: domain Description: LptD Location: 5453 9-57119 bp Feature: gene Location: 57192-58406 bp Feature: domain Description: PRK10770 Location: 57204-58398 bp Feature: domain Description: PRK10770 Location: 57204-583 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)