myRT

myRT report for GCA_900147365.1_409

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Seq: FRTG01000189.1 (13052 bp)
Overview 1 RT 1: 10943-12952 bp Neighborhood of RT #1 [10943, 13050] RVT-GII GIIM Feature: gene Location: 10943-11122 bp Feature: gene Location: 11306-11704 bp Feature: gene Location: 11854-13050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11995-12652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 995-1 2652 bp Feature: domain Description: GIIM Note: maturase Location: 12730-12952 bp Feature: domain Description: GIIM Note: maturase Location: 1 2730-1 2952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FRTG01000072.1 (94485 bp)
Overview 1 RT 1: 36058-44895 bp Neighborhood of RT #1 [36058, 44924] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 36058-37272 bp Feature: domain Description: PRK10770 Location: 36070-37264 bp Feature: domain Description: PRK10770 Location: 36070-372 64 bp Feature: gene Location: 37331-40120 bp Feature: domain Description: LptD Location: 37526-40106 bp Feature: domain Description: LptD Location: 3752 6-40106 bp Feature: gene Location: 40253-41965 bp Feature: domain Description: RVT_N Location: 40310-40553 bp Feature: domain Description: RVT_N Location: 40310-40553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40598-41231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40598-412 31 bp Feature: domain Description: YkfC Location: 41444-41594 bp Feature: domain Description: YkfC Location: 41444-41594 bp Feature: domain Description: HNH Note: nucleases Location: 41771-41909 bp Feature: domain Description: HNH Note: nucleases Location: 41771-41909 bp Feature: gene Location: 43237-44253 bp Feature: domain Description: COG3178 Location: 43240-44239 bp Feature: domain Description: COG3178 Location: 432 40-442 39 bp Feature: gene Location: 44250-44924 bp Feature: domain Description: NTP_transferase_like_1 Location: 44256-44895 bp Feature: domain Description: NTP_transferase_like_1 Location: 442 56-44895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FRTG01000083.1 (17666 bp)
Overview 1 RT 1: 287-4407 bp Neighborhood of RT #1 [287, 4407] RVT-UG17 SLATT_5 Feature: gene Location: 287-712 bp Feature: gene Location: 729-1199 bp Feature: gene Location: 1241-2605 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1469-2072 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1469-2072 bp Feature: gene Location: 2602-3144 bp Feature: domain Description: SLATT_5 Location: 2608-3118 bp Feature: domain Description: SLATT_5 Location: 2608-3 118 bp Feature: gene Location: 3505-4407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)