myRT

myRT report for GCA_900147675.1_1_2

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Seq: FRUJ01000210.1 (31480 bp)
Overview 1 RT 1: 10510-14806 bp Neighborhood of RT #1 [10510, 14889] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 10510-10689 bp Feature: gene Location: 10873-11271 bp Feature: gene Location: 11421-12689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11634-12291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 634-1 2291 bp Feature: domain Description: GIIM Note: maturase Location: 12369-12591 bp Feature: domain Description: GIIM Note: maturase Location: 1 2369-1 2591 bp Feature: gene Location: 13078-13719 bp Feature: domain Description: DUF772 Location: 13228-13423 bp Feature: domain Description: DUF772 Location: 1 3228-1 3423 bp Feature: gene Location: 14062-14889 bp Feature: domain Description: ABC_phnC Location: 14092-14806 bp Feature: domain Description: ABC_phnC Location: 1 4092-1 4806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRUJ01000289.1 (77656 bp)
Overview 1 RT 1: 25098-35401 bp 2 RT 2: 51660-60518 bp Neighborhood of RT #1 [25098, 35403] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [51660, 60547] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 25098-26219 bp Feature: domain Description: COG3177 Location: 25116-26208 bp Feature: domain Description: COG3177 Location: 2 5116-2 62 08 bp Feature: gene Location: 26940-28625 bp Feature: domain Description: RVT_N Location: 26997-27237 bp Feature: domain Description: RVT_N Location: 2 6997-2 72 37 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27285-27921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 85-2 792 1 bp Feature: domain Description: GIIM Note: maturase Location: 27975-28206 bp Feature: domain Description: GIIM Note: maturase Location: 2 7975-2 82 06 bp Feature: domain Description: HNH Note: nucleases Location: 28458-28596 bp Feature: domain Description: HNH Note: nucleases Location: 2 8458-2 8596 bp Feature: gene Location: 29706-33443 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 29814-30471 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 2 9814-30471 bp Feature: domain Description: PRK09776 Location: 30684-31155 bp Feature: domain Description: PRK09776 Location: 30684-31155 bp Feature: domain Description: PAS Location: 31200-31737 bp Feature: domain Description: PAS Location: 312 00-31737 bp Feature: domain Description: PRK10060 Location: 31746-33393 bp Feature: domain Description: PRK10060 Location: 31746-33393 bp Feature: gene Location: 33550-35403 bp Feature: domain Description: PRK05658 Location: 33562-35401 bp Feature: domain Description: PRK05658 Location: 33562 -35401 bp Feature: gene Location: 51660-52874 bp Feature: domain Description: PRK10770 Location: 51672-52866 bp Feature: domain Description: PRK10770 Location: 51672 -52 866 bp Feature: gene Location: 52933-55743 bp Feature: domain Description: LptD Location: 53128-55729 bp Feature: domain Description: LptD Location: 5312 8-5572 9 bp Feature: gene Location: 55876-57588 bp Feature: domain Description: RVT_N Location: 55933-56176 bp Feature: domain Description: RVT_N Location: 55933-56176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56221-56857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562 2 1-56857 bp Feature: domain Description: YkfC Location: 57064-57217 bp Feature: domain Description: YkfC Location: 57064-572 17 bp Feature: domain Description: HNH Note: nucleases Location: 57394-57532 bp Feature: domain Description: HNH Note: nucleases Location: 57394-57532 bp Feature: gene Location: 58860-59876 bp Feature: domain Description: COG3178 Location: 58863-59862 bp Feature: domain Description: COG3178 Location: 58863-59862 bp Feature: gene Location: 59873-60547 bp Feature: domain Description: NTP_transferase_like_1 Location: 59879-60518 bp Feature: domain Description: NTP_transferase_like_1 Location: 59879-60518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRUJ01000174.1 (46449 bp)
Overview 1 RT 1: 38901-44671 bp Neighborhood of RT #1 [38901, 44778] DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0389 SF2_C_SNF conj_PilL Feature: gene Location: 38901-39206 bp Feature: gene Location: 39343-40398 bp Feature: domain Description: DEXHc_Snf Location: 39562-39817 bp Feature: domain Description: DEXHc_Snf Location: 3 9562-3 9817 bp Feature: gene Location: 40995-42713 bp Feature: domain Description: RVT_N Location: 41052-41289 bp Feature: domain Description: RVT_N Location: 41052-41289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41340-41991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 40-41991 bp Feature: domain Description: GIIM Note: maturase Location: 42045-42276 bp Feature: domain Description: GIIM Note: maturase Location: 42045-42276 bp Feature: domain Description: HNHc Note: nucleases Location: 42510-42666 bp Feature: domain Description: HNHc Note: nucleases Location: 42510-42666 bp Feature: gene Location: 42799-44040 bp Feature: domain Description: KOG0389 Location: 42814-42934 bp Feature: domain Description: KOG03 89 Location: 42814-4293 4 bp Feature: domain Description: SF2_C_SNF Location: 43480-43876 bp Feature: domain Description: SF2_C_SNF Location: 43 480-43 876 bp Feature: gene Location: 44179-44778 bp Feature: domain Description: conj_PilL Location: 44362-44671 bp Feature: domain Description: conj_PilL Location: 443 62-44671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT