myRT

myRT report for GCA_900147825.1_2_2

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Seq: FRVA01000157.1 (133966 bp)
Overview 1 RT 1: 49238-58117 bp 2 RT 2: 74382-84676 bp Neighborhood of RT #1 [49238, 58125] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74382, 84687] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49238-49912 bp Feature: domain Description: NTP_transferase_like_1 Location: 49244-49883 bp Feature: domain Description: NTP_transferase_like_1 Location: 49244-49883 bp Feature: gene Location: 49909-50925 bp Feature: domain Description: COG3178 Location: 49912-50911 bp Feature: domain Description: COG31 78 Location: 4991 2-5091 1 bp Feature: gene Location: 52197-53909 bp Feature: domain Description: RVT_N Location: 52254-52497 bp Feature: domain Description: RVT_N Location: 52254-52497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52542-53178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52542-531 78 bp Feature: domain Description: YkfC Location: 53385-53538 bp Feature: domain Description: YkfC Location: 53385-53538 bp Feature: domain Description: HNH Note: nucleases Location: 53715-53853 bp Feature: domain Description: HNH Note: nucleases Location: 5371 5-53853 bp Feature: gene Location: 54042-56852 bp Feature: domain Description: LptD Location: 54237-56838 bp Feature: domain Description: LptD Location: 54237-56838 bp Feature: gene Location: 56911-58125 bp Feature: domain Description: PRK10770 Location: 56923-58117 bp Feature: domain Description: PRK1 0770 Location: 56923-581 1 7 bp Feature: gene Location: 74382-76235 bp Feature: domain Description: PRK05658 Location: 74394-76233 bp Feature: domain Description: PRK05658 Location: 74394-76233 bp Feature: gene Location: 76342-80079 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76450-77107 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76450-771 07 bp Feature: domain Description: PRK09776 Location: 77320-77791 bp Feature: domain Description: PRK09776 Location: 77320-77791 bp Feature: domain Description: PAS Location: 77836-78373 bp Feature: domain Description: PAS Location: 77836-78373 bp Feature: domain Description: PRK10060 Location: 78382-80029 bp Feature: domain Description: PRK1 0060 Location: 78382-80029 bp Feature: gene Location: 81160-82845 bp Feature: domain Description: RVT_N Location: 81217-81457 bp Feature: domain Description: RVT_N Location: 81 21 7-81 457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81505-82141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 505-821 41 bp Feature: domain Description: GIIM Note: maturase Location: 82195-82426 bp Feature: domain Description: GIIM Note: maturase Location: 821 95-82426 bp Feature: domain Description: HNH Note: nucleases Location: 82678-82816 bp Feature: domain Description: HNH Note: nucleases Location: 82678-8281 6 bp Feature: gene Location: 83566-84687 bp Feature: domain Description: COG3177 Location: 83584-84676 bp Feature: domain Description: COG31 77 Location: 83584-84676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRVA01000306.1 (2418 bp)
Overview 1 RT 1: 1-2289 bp Neighborhood of RT #1 [1, 2336] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-189 bp Feature: gene Location: 220-348 bp Feature: gene Location: 618-2336 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: domain Description: RVT_N Location: 675-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1668-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2133-2289 bp Feature: domain Description: HNHc Note: nucleases Location: 2 133-2 2 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRVA01000287.1 (30236 bp)
Overview 1 RT 1: 19234-23530 bp Neighborhood of RT #1 [19234, 23613] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 19234-19413 bp Feature: gene Location: 19597-19995 bp Feature: gene Location: 20145-21413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20358-21015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203 58-21015 bp Feature: domain Description: GIIM Note: maturase Location: 21093-21315 bp Feature: domain Description: GIIM Note: maturase Location: 21093 -213 15 bp Feature: gene Location: 21802-22443 bp Feature: domain Description: DUF772 Location: 21952-22147 bp Feature: domain Description: DUF772 Location: 21952-22147 bp Feature: gene Location: 22786-23613 bp Feature: domain Description: ABC_phnC Location: 22816-23530 bp Feature: domain Description: ABC_phnC Location: 22816-23 53 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT