myRT

myRT report for GCA_900147925.1_4_2

Download annotations/find similar RTs

Seq: FRVI01000121.1 (133932 bp)
Overview 1 RT 1: 49228-58107 bp 2 RT 2: 74372-84666 bp Neighborhood of RT #1 [49228, 58115] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74372, 84677] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49228-49902 bp Feature: domain Description: NTP_transferase_like_1 Location: 49234-49873 bp Feature: domain Description: NTP_transferase_like_1 Location: 49234-49873 bp Feature: gene Location: 49899-50915 bp Feature: domain Description: COG3178 Location: 49902-50901 bp Feature: domain Description: COG31 78 Location: 49902-50901 bp Feature: gene Location: 52187-53899 bp Feature: domain Description: RVT_N Location: 52244-52487 bp Feature: domain Description: RVT_N Location: 52244-52487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52532-53168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52532-531 68 bp Feature: domain Description: YkfC Location: 53375-53528 bp Feature: domain Description: YkfC Location: 53375-53528 bp Feature: domain Description: HNH Note: nucleases Location: 53705-53843 bp Feature: domain Description: HNH Note: nucleases Location: 53705-53843 bp Feature: gene Location: 54032-56842 bp Feature: domain Description: LptD Location: 54227-56828 bp Feature: domain Description: LptD Location: 54227-56828 bp Feature: gene Location: 56901-58115 bp Feature: domain Description: PRK10770 Location: 56913-58107 bp Feature: domain Description: PRK1 0770 Location: 5691 3-581 07 bp Feature: gene Location: 74372-76225 bp Feature: domain Description: PRK05658 Location: 74384-76223 bp Feature: domain Description: PRK05658 Location: 74384-76223 bp Feature: gene Location: 76332-80069 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76440-77097 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76440-77097 bp Feature: domain Description: PRK09776 Location: 77310-77781 bp Feature: domain Description: PRK09776 Location: 7731 0-77781 bp Feature: domain Description: PAS Location: 77826-78363 bp Feature: domain Description: PAS Location: 77826-78363 bp Feature: domain Description: PRK10060 Location: 78372-80019 bp Feature: domain Description: PRK1 0060 Location: 78372-8001 9 bp Feature: gene Location: 81150-82835 bp Feature: domain Description: RVT_N Location: 81207-81447 bp Feature: domain Description: RVT_N Location: 81 207-81 447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81495-82131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 495-821 31 bp Feature: domain Description: GIIM Note: maturase Location: 82185-82416 bp Feature: domain Description: GIIM Note: maturase Location: 821 85-8241 6 bp Feature: domain Description: HNH Note: nucleases Location: 82668-82806 bp Feature: domain Description: HNH Note: nucleases Location: 82668-82806 bp Feature: gene Location: 83556-84677 bp Feature: domain Description: COG3177 Location: 83574-84666 bp Feature: domain Description: COG31 77 Location: 83574-84666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRVI01000069.1 (2418 bp)
Overview 1 RT 1: 83-2415 bp Neighborhood of RT #1 [83, 2415] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1801 bp Feature: domain Description: RVT_N Location: 140-377 bp Feature: domain Description: RVT_N Location: 140-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 8-1079 bp Feature: domain Description: GIIM Note: maturase Location: 1133-1364 bp Feature: domain Description: GIIM Note: maturase Location: 1133-1364 bp Feature: domain Description: HNHc Note: nucleases Location: 1598-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1598-1754 bp Feature: gene Location: 2071-2199 bp Feature: gene Location: 2230-2415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FRVI01000138.1 (30216 bp)
Overview 1 RT 1: 6614-10993 bp Neighborhood of RT #1 [6614, 10993] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 6614-7441 bp Feature: domain Description: ABC_phnC Location: 6644-7358 bp Feature: domain Description: ABC_phnC Location: 6644-73 58 bp Feature: gene Location: 7784-8425 bp Feature: domain Description: DUF772 Location: 7934-8129 bp Feature: domain Description: DUF772 Location: 793 4-8129 bp Feature: gene Location: 8814-10082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9027-9684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9027-9684 bp Feature: domain Description: GIIM Note: maturase Location: 9762-9984 bp Feature: domain Description: GIIM Note: maturase Location: 9762-9984 bp Feature: gene Location: 10232-10630 bp Feature: gene Location: 10814-10993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT