myRT

myRT report for GCA_900147935.1_410_1

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Seq: FRVL01000290.1 (22402 bp)
Overview 1 RT 1: 5401-9521 bp Neighborhood of RT #1 [5401, 9521] RVT-UG17 SLATT_5 Feature: gene Location: 5401-5826 bp Feature: gene Location: 5843-6313 bp Feature: gene Location: 6355-7719 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6583-7186 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6583-71 86 bp Feature: gene Location: 7716-8258 bp Feature: domain Description: SLATT_5 Location: 7722-8232 bp Feature: domain Description: SLATT_5 Location: 7722-8232 bp Feature: gene Location: 8619-9521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: FRVL01000339.1 (14303 bp)
Overview 1 RT 1: 5093-9389 bp Neighborhood of RT #1 [5093, 9472] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 5093-5272 bp Feature: gene Location: 5456-5854 bp Feature: gene Location: 6004-7272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6217-6874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 17-6874 bp Feature: domain Description: GIIM Note: maturase Location: 6952-7174 bp Feature: domain Description: GIIM Note: maturase Location: 6952 -7174 bp Feature: gene Location: 7661-8302 bp Feature: domain Description: DUF772 Location: 7811-8006 bp Feature: domain Description: DUF772 Location: 7811-8006 bp Feature: gene Location: 8645-9472 bp Feature: domain Description: ABC_phnC Location: 8675-9389 bp Feature: domain Description: ABC_phnC Location: 8675-9389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: FRVL01000267.1 (125265 bp)
Overview 1 RT 1: 66844-75681 bp Neighborhood of RT #1 [66844, 75710] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 66844-68058 bp Feature: domain Description: PRK10770 Location: 66856-68050 bp Feature: domain Description: PRK10770 Location: 66856-68050 bp Feature: gene Location: 68117-70906 bp Feature: domain Description: LptD Location: 68312-70892 bp Feature: domain Description: LptD Location: 683 12-70892 bp Feature: gene Location: 71039-72751 bp Feature: domain Description: RVT_N Location: 71096-71339 bp Feature: domain Description: RVT_N Location: 71096-713 3 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71384-72017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713 84-72017 bp Feature: domain Description: YkfC Location: 72230-72380 bp Feature: domain Description: YkfC Location: 7223 0-723 80 bp Feature: domain Description: HNH Note: nucleases Location: 72557-72695 bp Feature: domain Description: HNH Note: nucleases Location: 72557-72695 bp Feature: gene Location: 74023-75039 bp Feature: domain Description: COG3178 Location: 74026-75025 bp Feature: domain Description: COG3 178 Location: 74026-75025 bp Feature: gene Location: 75036-75710 bp Feature: domain Description: NTP_transferase_like_1 Location: 75042-75681 bp Feature: domain Description: NTP_transferase_like_1 Location: 75042-75681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)